The 2.0 version of rSNPBase

Variant report

Variant rs57303941
Chromosome Location chr5:108301432-108301433
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108203800-108323400 Weak transcription Primary B cells from cord blood blood
2 chr5:108217600-108323200 Weak transcription Left Ventricle heart
3 chr5:108230200-108302400 Weak transcription HSMM muscle
4 chr5:108254000-108311200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr5:108277600-108322400 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr5:108278000-108308200 Weak transcription Fetal Kidney kidney
7 chr5:108279200-108302600 Weak transcription Ovary ovary
8 chr5:108279200-108325600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr5:108281000-108302400 Weak transcription Dnd41 blood
10 chr5:108281000-108302600 Weak transcription HMEC breast
11 chr5:108281000-108313400 Weak transcription Adipose Nuclei Adipose
12 chr5:108281200-108302600 Weak transcription Brain Angular Gyrus brain
13 chr5:108282200-108324600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr5:108282400-108327200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr5:108283400-108319000 Weak transcription Muscle Satellite Cultured Cells --
16 chr5:108287800-108310000 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr5:108289200-108309200 Weak transcription Hela-S3 cervix
18 chr5:108289200-108318600 Weak transcription NHDF-Ad bronchial
19 chr5:108290000-108313600 Weak transcription Aorta Aorta
20 chr5:108290000-108322000 Weak transcription Rectal Smooth Muscle rectum
21 chr5:108290000-108328800 Weak transcription Esophagus oesophagus
22 chr5:108292600-108302600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr5:108293400-108303400 Weak transcription Fetal Lung lung
24 chr5:108293400-108325600 Weak transcription NHEK skin
25 chr5:108294000-108302600 Weak transcription Liver Liver
26 chr5:108294400-108329400 Weak transcription Brain Hippocampus Middle brain
27 chr5:108295200-108319400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr5:108295800-108302400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr5:108295800-108316600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr5:108296600-108307800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr5:108296600-108311800 Weak transcription HSMMtube muscle
32 chr5:108297000-108313400 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr5:108298000-108316400 Weak transcription Brain Substantia Nigra brain
34 chr5:108298200-108315800 Weak transcription HepG2 liver
35 chr5:108299600-108328800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr5:108300400-108314200 Weak transcription NH-A brain
37 chr5:108301000-108302600 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr5:108301400-108302000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr5:108301400-108302400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr5:108301400-108328600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015