Variant report

Variant	rs573049106
Chromosome Location	chr18:29832325-29832326
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1056007	chr18:29711974-29899564	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv833616	chr18:29792336-29964212	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	nsv528846	chr18:29832147-29890042	Strong transcription Enhancers Weak transcription Genic enhancers Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:29821200-29832400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr18:29823800-29848000	Weak transcription	Aorta	Aorta
3	chr18:29831000-29832800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr18:29831200-29832600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr18:29831200-29832600	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr18:29831200-29832800	Enhancers	Primary hematopoietic stem cells	blood
7	chr18:29831400-29832400	Enhancers	Fetal Intestine Large	intestine
8	chr18:29831400-29832600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
9	chr18:29831400-29832800	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr18:29831400-29832800	Enhancers	iPS-15b Cell Line	embryonic stem cell
11	chr18:29831400-29833000	Enhancers	ES-I3 Cell Line	embryonic stem cell
12	chr18:29831400-29847600	Weak transcription	Pancreas	Pancrea
13	chr18:29831600-29832600	Weak transcription	H9 Cell Line	embryonic stem cell
14	chr18:29831600-29833400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr18:29831800-29833000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr18:29832000-29832400	Weak transcription	Fetal Intestine Small	intestine
17	chr18:29832200-29832600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
18	chr18:29832200-29832600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr18:29832200-29832800	Enhancers	H1 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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