Variant report

Variant rs573123801
Chromosome Location chr1:10698666-10698667
allele -/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10651600-10715800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr1:10685200-10699400 Weak transcription Aorta Aorta
3 chr1:10691600-10703000 Weak transcription Primary B cells from peripheral blood blood
4 chr1:10691600-10706000 Weak transcription Dnd41 blood
5 chr1:10692400-10699400 Weak transcription Duodenum Mucosa Duodenum
6 chr1:10693200-10699400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr1:10694400-10699400 Weak transcription Liver Liver
8 chr1:10695800-10700400 Strong transcription Fetal Intestine Small intestine
9 chr1:10696000-10699400 Weak transcription Pancreas Pancrea
10 chr1:10696000-10699600 Weak transcription Fetal Heart heart
11 chr1:10696200-10704000 Weak transcription HSMMtube muscle
12 chr1:10696400-10699600 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:10696600-10698800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr1:10696600-10699400 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr1:10697400-10700800 Strong transcription Gastric stomach
16 chr1:10697400-10722000 Strong transcription Sigmoid Colon Sigmoid Colon
17 chr1:10697600-10698800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
18 chr1:10697600-10698800 Genic enhancers Lung lung
19 chr1:10697800-10700600 Weak transcription Stomach Mucosa stomach
20 chr1:10697800-10703400 Weak transcription HMEC breast
21 chr1:10698200-10698800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
22 chr1:10698200-10698800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
23 chr1:10698200-10698800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:10698200-10698800 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
25 chr1:10698200-10698800 Bivalent Enhancer Fetal Brain Male brain
26 chr1:10698200-10698800 Active TSS Fetal Lung lung
27 chr1:10698200-10698800 Enhancers Stomach Smooth Muscle stomach
28 chr1:10698200-10698800 Flanking Bivalent TSS/Enh HUVEC blood vessel
29 chr1:10698200-10699000 Flanking Active TSS Primary hematopoietic stem cells blood
30 chr1:10698200-10699000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr1:10698200-10699000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:10698200-10699000 Genic enhancers Esophagus oesophagus
33 chr1:10698200-10699000 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
34 chr1:10698200-10699000 Active TSS Psoas Muscle Psoas
35 chr1:10698200-10699400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
36 chr1:10698200-10699600 Bivalent/Poised TSS Fetal Brain Female brain
37 chr1:10698200-10699800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
38 chr1:10698200-10713600 Weak transcription Small Intestine intestine
39 chr1:10698400-10698800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
40 chr1:10698400-10698800 Flanking Bivalent TSS/Enh hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr1:10698400-10698800 Flanking Bivalent TSS/Enh hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr1:10698400-10698800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
43 chr1:10698400-10698800 Flanking Bivalent TSS/Enh ES-UCSF4 Cell Line embryonic stem cell
44 chr1:10698400-10698800 Enhancers Primary B cells from cord blood blood
45 chr1:10698400-10698800 Active TSS Primary T cells from cord blood blood
46 chr1:10698400-10698800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
47 chr1:10698400-10698800 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:10698400-10698800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr1:10698400-10698800 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin01 Skin
50 chr1:10698400-10698800 Active TSS Skeletal Muscle Male skeletal muscle

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