The 2.0 version of rSNPBase

Variant report

Variant rs573203864
Chromosome Location chr17:45164174-45164175
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:45145000-45164600 Weak transcription Brain Angular Gyrus brain
2 chr17:45145000-45169800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr17:45145000-45169800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr17:45145000-45169800 Weak transcription Fetal Lung lung
5 chr17:45145000-45176400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr17:45145000-45176600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr17:45145000-45176800 Weak transcription Lung lung
8 chr17:45145200-45169200 Weak transcription Primary B cells from cord blood blood
9 chr17:45145200-45170200 Weak transcription Brain Germinal Matrix brain
10 chr17:45145200-45176600 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr17:45145400-45176000 Weak transcription Primary T cells from cord blood blood
12 chr17:45146400-45169800 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr17:45146400-45170800 Weak transcription Dnd41 blood
14 chr17:45148800-45175400 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr17:45149000-45164200 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr17:45149000-45168600 Weak transcription Primary B cells from peripheral blood blood
17 chr17:45149000-45170000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr17:45149000-45173800 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr17:45149600-45175400 Weak transcription Primary T cells fromperipheralblood blood
20 chr17:45149600-45176800 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr17:45150200-45170000 Weak transcription Ovary ovary
22 chr17:45150200-45174600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr17:45150600-45164600 Weak transcription Brain Anterior Caudate brain
24 chr17:45150600-45167200 Weak transcription Spleen Spleen
25 chr17:45150600-45169800 Weak transcription Fetal Muscle Leg muscle
26 chr17:45150600-45170600 Weak transcription HSMM muscle
27 chr17:45150600-45176400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr17:45150600-45176800 Weak transcription Left Ventricle heart
29 chr17:45155000-45169800 Weak transcription Fetal Brain Female brain
30 chr17:45155600-45170200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr17:45155600-45170200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr17:45155600-45170200 Weak transcription NHEK skin
33 chr17:45155600-45173600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr17:45158200-45170600 Weak transcription A549 lung
35 chr17:45158600-45169800 Weak transcription Fetal Thymus thymus
36 chr17:45158600-45175000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr17:45159200-45175600 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr17:45159600-45169800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr17:45159800-45169800 Weak transcription Fetal Stomach stomach
40 chr17:45159800-45170200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr17:45161200-45164400 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr17:45162200-45164200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr17:45162400-45164200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr17:45162600-45170000 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr17:45162800-45164800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr17:45163200-45164400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr17:45163200-45165200 Weak transcription K562 blood
48 chr17:45163200-45170200 Weak transcription Primary hematopoietic stem cells blood
49 chr17:45163200-45176800 Weak transcription Fetal Intestine Large intestine
50 chr17:45163400-45170200 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015