Variant report

Variant rs573270754
Chromosome Location chr1:47046742-47046743
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47020800-47047400 Weak transcription Brain Germinal Matrix brain
2 chr1:47021000-47057000 Weak transcription Fetal Brain Male brain
3 chr1:47021800-47054600 Weak transcription A549 lung
4 chr1:47022400-47053600 Strong transcription Thymus Thymus
5 chr1:47022600-47051400 Strong transcription Skeletal Muscle Female skeletal muscle
6 chr1:47022600-47051600 Strong transcription Liver Liver
7 chr1:47023000-47047400 Strong transcription Primary T cells from cord blood blood
8 chr1:47023200-47047200 Strong transcription Fetal Thymus thymus
9 chr1:47023200-47051200 Strong transcription Fetal Muscle Leg muscle
10 chr1:47023200-47060000 Strong transcription Sigmoid Colon Sigmoid Colon
11 chr1:47023800-47053200 Strong transcription Breast Myoepithelial Primary Cells Breast
12 chr1:47024000-47054800 Weak transcription HUVEC blood vessel
13 chr1:47025600-47062400 Weak transcription Fetal Heart heart
14 chr1:47027200-47047600 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr1:47035200-47047600 Weak transcription NHDF-Ad bronchial
16 chr1:47035200-47048000 Strong transcription Duodenum Mucosa Duodenum
17 chr1:47035200-47053000 Strong transcription Spleen Spleen
18 chr1:47035600-47053400 Strong transcription Fetal Muscle Trunk muscle
19 chr1:47036000-47047400 Weak transcription Fetal Lung lung
20 chr1:47036000-47056400 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr1:47036000-47060000 Strong transcription Rectal Mucosa Donor 29 rectum
22 chr1:47036400-47053200 Strong transcription Fetal Stomach stomach
23 chr1:47037800-47047400 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr1:47037800-47057000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr1:47038400-47053200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:47038600-47050800 Strong transcription Primary B cells from peripheral blood blood
27 chr1:47039000-47052600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr1:47039000-47054800 Weak transcription Hela-S3 cervix
29 chr1:47039200-47048200 Weak transcription Brain Substantia Nigra brain
30 chr1:47039200-47053000 Weak transcription Right Atrium heart
31 chr1:47039200-47060400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:47039400-47050200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr1:47039600-47052400 Strong transcription Duodenum Smooth Muscle Duodenum
34 chr1:47039600-47060000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:47040000-47053000 Strong transcription Left Ventricle heart
36 chr1:47040000-47053200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:47040200-47060400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr1:47040800-47053000 Strong transcription NHEK skin
39 chr1:47041000-47047000 Strong transcription Gastric stomach
40 chr1:47041000-47047200 Strong transcription Primary T helper naive cells fromperipheralblood blood
41 chr1:47041000-47053600 Strong transcription Aorta Aorta
42 chr1:47041200-47052400 Strong transcription Right Ventricle heart
43 chr1:47041200-47053200 Strong transcription Fetal Intestine Small intestine
44 chr1:47041200-47054800 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr1:47041400-47047400 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr1:47041600-47046800 Strong transcription Rectal Mucosa Donor 31 rectum
47 chr1:47041600-47047000 Strong transcription Fetal Intestine Large intestine
48 chr1:47041600-47053200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr1:47042200-47049200 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr1:47042200-47057200 Weak transcription ES-I3 Cell Line embryonic stem cell

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