Variant report

Variant	rs573359788
Chromosome Location	chr14:81392685-81392686
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv832840	chr14:81270033-81423583	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	n/a
3	esv2761847	chr14:81392124-81453137	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:62 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81351400-81398400	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr14:81358000-81396600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr14:81359400-81406000	Weak transcription	A549	lung
4	chr14:81359800-81396200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
5	chr14:81359800-81407200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr14:81360200-81393800	Weak transcription	HMEC	breast
7	chr14:81362200-81392800	Weak transcription	Fetal Muscle Leg	muscle
8	chr14:81364400-81395800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
9	chr14:81364400-81395800	Weak transcription	GM12878-XiMat	blood
10	chr14:81365200-81393000	Weak transcription	Stomach Smooth Muscle	stomach
11	chr14:81369600-81397200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr14:81370400-81393600	Weak transcription	NHEK	skin
13	chr14:81371600-81392800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr14:81375400-81407600	Weak transcription	Gastric	stomach
15	chr14:81375800-81392800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr14:81379400-81407400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr14:81380800-81392800	Weak transcription	Skeletal Muscle Male	skeletal muscle
18	chr14:81382600-81393200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr14:81382600-81406400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr14:81382800-81396000	Weak transcription	Primary T cells fromperipheralblood	blood
21	chr14:81382800-81396200	Weak transcription	Monocytes-CD14+_RO01746	blood
22	chr14:81382800-81396800	Weak transcription	Primary B cells from cord blood	blood
23	chr14:81382800-81397200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
24	chr14:81382800-81397200	Weak transcription	Rectal Mucosa Donor 29	rectum
25	chr14:81383400-81393600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr14:81384600-81392800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
27	chr14:81387800-81407200	Weak transcription	H9 Cell Line	embryonic stem cell
28	chr14:81388200-81393600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr14:81390000-81405000	Weak transcription	HUES64 Cell Line	embryonic stem cell
30	chr14:81390000-81407200	Weak transcription	HUES6 Cell Line	embryonic stem cell
31	chr14:81391200-81393600	Enhancers	Primary neutrophils fromperipheralblood	blood
32	chr14:81391800-81393000	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
33	chr14:81392000-81392800	Enhancers	Primary hematopoietic stem cells short term culture	blood
34	chr14:81392000-81394200	Genic enhancers	Dnd41	blood
35	chr14:81392200-81393200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
36	chr14:81392200-81393600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr14:81392200-81394200	Strong transcription	Thymus	Thymus
38	chr14:81392200-81394400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr14:81392200-81407200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
40	chr14:81392400-81393400	Enhancers	HSMM	muscle
41	chr14:81392400-81393600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
42	chr14:81392400-81393600	Enhancers	Right Atrium	heart
43	chr14:81392400-81393800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
44	chr14:81392400-81394000	Enhancers	HSMMtube	muscle
45	chr14:81392400-81406600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
46	chr14:81392600-81392800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr14:81392600-81392800	ZNF genes & repeats	Esophagus	oesophagus
48	chr14:81392600-81393600	Enhancers	Skeletal Muscle Female	skeletal muscle
49	chr14:81392600-81394000	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
50	chr14:81392600-81394000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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