Variant report

Variant	rs57337873
Chromosome Location	chr8:119892385-119892386
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs4520195	0.85[AMR][1000 genomes]
rs57098524	0.85[AMR][1000 genomes]
rs60864203	0.85[AMR][1000 genomes]
rs7002995	0.85[AMR][1000 genomes]
rs73319635	0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831444	chr8:119757355-119915966	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	nsv470234	chr8:119856209-119906530	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv891415	chr8:119886923-119921354	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119889000-119895200	Enhancers	Hela-S3	cervix
2	chr8:119889600-119892400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr8:119889600-119895000	Enhancers	NHDF-Ad	bronchial
4	chr8:119889600-119895200	Enhancers	NHLF	lung
5	chr8:119889800-119893200	Weak transcription	Aorta	Aorta
6	chr8:119890000-119892400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr8:119890400-119892600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr8:119890600-119892600	Weak transcription	Fetal Intestine Small	intestine
9	chr8:119891000-119893600	Weak transcription	A549	lung
10	chr8:119891000-119893800	Weak transcription	NHEK	skin
11	chr8:119891200-119892800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr8:119891400-119893000	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr8:119891600-119893400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr8:119891600-119894200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr8:119891800-119893000	Weak transcription	Osteobl	bone
16	chr8:119891800-119893200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr8:119891800-119893400	Weak transcription	NH-A	brain
18	chr8:119892000-119892600	Weak transcription	HUVEC	blood vessel

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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