Variant report

Variant	rs573394476
Chromosome Location	chr17:17686779-17686780
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	UBTF	chr17:17686755-17687017	K562	blood:	n/a	n/a
2	MXI1	chr17:17685078-17690155	SK-N-SH	brain:	n/a	chr17:17688092-17688107
3	CTBP2	chr17:17686048-17688034	H1-hESC	embryonic stem cell:	n/a	n/a
4	FOXA1	chr17:17686601-17686784	T-47D	breast:	n/a	n/a
5	MAX	chr17:17685955-17687192	H1-hESC	embryonic stem cell:	n/a	chr17:17686730-17686740 chr17:17687056-17687066 chr17:17685993-17686003 chr17:17686470-17686480 chr17:17687000-17687009 chr17:17686269-17686279
6	POLR2A	chr17:17686687-17686918	HepG2	liver:	n/a	n/a
7	FOXM1	chr17:17686761-17687336	GM12878	blood:	n/a	n/a
8	TAF1	chr17:17686477-17687301	H1-neurons	neurons:	n/a	n/a
9	ESR1	chr17:17686453-17686868	T-47D	breast:	n/a	chr17:17686621-17686638 chr17:17686621-17686636
10	CTCF	chr17:17686762-17686826	MCF-7	breast:	n/a	chr17:17686800-17686813
11	CEBPB	chr17:17686742-17686890	H1-hESC	embryonic stem cell:	n/a	n/a
12	ESR1	chr17:17686443-17686857	T-47D	breast:	n/a	chr17:17686621-17686638 chr17:17686621-17686636
13	POLR2A	chr17:17686504-17686893	K562	blood:	n/a	n/a
14	ZNF263	chr17:17686666-17687158	HEK293-T-REx	kidney:	n/a	n/a
15	POLR2A	chr17:17686490-17687053	ECC-1	luminal epithelium:	n/a	n/a
16	TCF12	chr17:17686679-17687083	GM12878	blood:	n/a	n/a
17	CTCF	chr17:17686680-17686830	GM12871	blood:	n/a	chr17:17686800-17686813
18	CTCF	chr17:17686347-17686898	GM19238	blood:	n/a	chr17:17686800-17686813
19	EGR1	chr17:17686392-17687796	ECC-1	luminal epithelium:	n/a	chr17:17687097-17687106 chr17:17686721-17686734 chr17:17687012-17687022 chr17:17686722-17686733 chr17:17686659-17686669 chr17:17686657-17686670 chr17:17687097-17687107 chr17:17686721-17686735 chr17:17687093-17687103 chr17:17686724-17686733 chr17:17687092-17687102 chr17:17686721-17686734 chr17:17687094-17687107 chr17:17687093-17687108 chr17:17686721-17686734 chr17:17686662-17686672 chr17:17686441-17686454 chr17:17686724-17686734 chr17:17687094-17687108 chr17:17686717-17686739 chr17:17687013-17687022 chr17:17687094-17687107 chr17:17686720-17686735 chr17:17686658-17686669 chr17:17687012-17687025 chr17:17687081-17687094 chr17:17686721-17686734 chr17:17686729-17686739 chr17:17687094-17687107 chr17:17687094-17687107 chr17:17686442-17686453
20	POLR2A	chr17:17686081-17687152	GM18951	blood:	n/a	n/a
21	NR2F2	chr17:17686518-17686860	MCF-7	breast:	n/a	n/a
22	ESR1	chr17:17686430-17686867	ECC-1	luminal epithelium:	n/a	chr17:17686621-17686638 chr17:17686621-17686636
23	UBTF	chr17:17686487-17687015	K562	blood:	n/a	n/a
24	EGR1	chr17:17686385-17687173	K562	blood:	n/a	chr17:17687097-17687106 chr17:17686721-17686734 chr17:17687012-17687022 chr17:17686722-17686733 chr17:17686659-17686669 chr17:17686657-17686670 chr17:17687097-17687107 chr17:17686721-17686735 chr17:17687093-17687103 chr17:17686724-17686733 chr17:17687092-17687102 chr17:17686721-17686734 chr17:17687094-17687107 chr17:17687093-17687108 chr17:17686721-17686734 chr17:17686662-17686672 chr17:17686441-17686454 chr17:17686724-17686734 chr17:17687094-17687108 chr17:17686717-17686739 chr17:17687013-17687022 chr17:17687094-17687107 chr17:17686720-17686735 chr17:17686658-17686669 chr17:17687012-17687025 chr17:17687081-17687094 chr17:17686721-17686734 chr17:17686729-17686739 chr17:17687094-17687107 chr17:17687094-17687107 chr17:17686442-17686453
25	ESR1	chr17:17686457-17686921	T-47D	breast:	n/a	chr17:17686621-17686638 chr17:17686621-17686636
26	RXRA	chr17:17686392-17686782	HepG2	liver:	n/a	n/a
27	ELF1	chr17:17686085-17687216	GM12878	blood:	n/a	chr17:17686604-17686613 chr17:17686724-17686736 chr17:17686443-17686452 chr17:17686660-17686672 chr17:17686665-17686674 chr17:17686439-17686451 chr17:17687090-17687102 chr17:17686248-17686257
28	CTCF	chr17:17686660-17686810	GM12868	blood:	n/a	n/a
29	EP300	chr17:17686561-17687795	ECC-1	luminal epithelium:	n/a	chr17:17687090-17687106
30	ESR1	chr17:17686461-17686864	T-47D	breast:	n/a	chr17:17686621-17686638 chr17:17686621-17686636
31	JUND	chr17:17686669-17686960	H1-hESC	embryonic stem cell:	n/a	chr17:17686729-17686738
32	ESR1	chr17:17686444-17686820	T-47D	breast:	n/a	chr17:17686621-17686638 chr17:17686621-17686636
33	CTCF	chr17:17686742-17686911	NHEK	skin:	n/a	chr17:17686800-17686813
34	TCF12	chr17:17686380-17687959	ECC-1	luminal epithelium:	n/a	n/a
35	CTCF	chr17:17686731-17686837	GM10266	blood:	n/a	chr17:17686800-17686813
36	CTCF	chr17:17686765-17686862	GM12878	blood:	n/a	chr17:17686800-17686813
37	MAZ	chr17:17686396-17686796	HepG2	liver:	n/a	chr17:17686730-17686740 chr17:17686470-17686480
38	MAX	chr17:17686361-17686928	K562	blood:	n/a	chr17:17686730-17686740 chr17:17686470-17686480
39	CTCF	chr17:17686731-17686898	GM19240	blood:	n/a	chr17:17686800-17686813
40	POLR2A	chr17:17686468-17686828	HCT-116	colon:	n/a	n/a
41	RAD21	chr17:17686705-17686931	HepG2	liver:	n/a	chr17:17686797-17686811 chr17:17686799-17686813
42	EGR1	chr17:17686352-17687196	HCT-116	colon:	n/a	chr17:17687097-17687106 chr17:17686721-17686734 chr17:17687012-17687022 chr17:17686722-17686733 chr17:17686659-17686669 chr17:17686657-17686670 chr17:17687097-17687107 chr17:17686721-17686735 chr17:17687093-17687103 chr17:17686724-17686733 chr17:17687092-17687102 chr17:17686721-17686734 chr17:17687094-17687107 chr17:17687093-17687108 chr17:17686721-17686734 chr17:17686662-17686672 chr17:17686441-17686454 chr17:17686724-17686734 chr17:17687094-17687108 chr17:17686717-17686739 chr17:17687013-17687022 chr17:17687094-17687107 chr17:17686720-17686735 chr17:17686658-17686669 chr17:17687012-17687025 chr17:17687081-17687094 chr17:17686721-17686734 chr17:17686729-17686739 chr17:17687094-17687107 chr17:17687094-17687107 chr17:17686442-17686453
43	MTA3	chr17:17686508-17687869	GM12878	blood:	n/a	n/a
44	MYC	chr17:17686294-17686853	K562	blood:	n/a	chr17:17686730-17686740 chr17:17686470-17686480
45	TEAD4	chr17:17686418-17687939	ECC-1	luminal epithelium:	n/a	chr17:17687665-17687674
46	POLR2A	chr17:17685951-17687160	K562	blood:	n/a	n/a
47	CHD1	chr17:17686769-17686867	H1-hESC	embryonic stem cell:	n/a	n/a
48	POLR2A	chr17:17686405-17686889	HCT-116	colon:	n/a	n/a
49	TCF12	chr17:17686602-17687032	H1-hESC	embryonic stem cell:	n/a	n/a
50	NR3C1	chr17:17686559-17686918	ECC-1	luminal epithelium:	n/a	chr17:17686559-17686572

No.	Distal block	Cell Line	Cell type
1	chr17:17583171..17587600-chr17:17683205..17687633,5	MCF-7	breast:
2	chr17:17683965..17687759-chr17:17739269..17741858,4	K562	blood:
3	chr17:17685908..17688638-chr17:17739625..17744756,9	MCF-7	breast:
4	chr17:17623385..17625295-chr17:17685917..17688281,2	MCF-7	breast:
5	chr17:17581707..17587972-chr17:17684185..17691006,14	MCF-7	breast:
6	chr17:17680425..17682951-chr17:17684524..17687112,3	K562	blood:
7	chr17:17583782..17586496-chr17:17685897..17688578,2	K562	blood:
8	chr17:17596273..17597839-chr17:17685487..17687747,2	MCF-7	breast:
9	chr10:121484591..121485327-chr17:17686116..17687101,2	NB4	blood:
10	chr17:17685362..17690405-chr17:17711256..17718354,8	MCF-7	breast:
11	chr17:17658357..17659243-chr17:17686198..17687096,5	MCF-7	breast:
12	chr17:17686748..17688338-chr17:17699379..17701394,2	MCF-7	breast:
13	chr17:17673495..17677565-chr17:17684022..17690653,6	MCF-7	breast:
14	chr17:17681173..17684236-chr17:17685903..17687654,3	MCF-7	breast:
15	chr17:17686081..17687652-chrX:48392038..48393539,2	K562	blood:
16	chr17:17685589..17688430-chr17:17722427..17724500,2	MCF-7	breast:
17	chr17:17658357..17659324-chr17:17686198..17687096,5	MCF-7	breast:
18	chr17:17686202..17687048-chr17:17718326..17718902,2	MCF-7	breast:
19	chr17:17685392..17687636-chr17:17695212..17698181,2	MCF-7	breast:
20	chr17:17685134..17688509-chr17:17722863..17726624,4	MCF-7	breast:
21	chr17:17685438..17688763-chr17:17737889..17741903,5	K562	blood:
22	chr17:17664602..17666200-chr17:17686548..17688309,2	MCF-7	breast:

Variant related genes	Relation type
SMCR5	TF binding region
ENSG00000072310	Chromatin interaction
ENSG00000226746	Chromatin interaction
ENSG00000108557	Chromatin interaction
ENSG00000207839	Chromatin interaction
ENSG00000237328	Chromatin interaction
ENSG00000264167	Chromatin interaction

Extended variants
information (count: 35 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:35 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv907748	chr17:17412032-17782404	Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	89 gene(s)	inside rSNPs	diseases
2	nsv1065270	chr17:17430116-17823086	Weak transcription Flanking Active TSS Genic enhancers Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	91 gene(s)	inside rSNPs	diseases
3	nsv543236	chr17:17430116-17823086	Bivalent Enhancer Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	91 gene(s)	inside rSNPs	diseases
4	nsv907752	chr17:17569012-17750907	Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
5	nsv531183	chr17:17571035-18205309	Genic enhancers Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	123 gene(s)	inside rSNPs	diseases
6	nsv907753	chr17:17573539-17747289	Genic enhancers Enhancers Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
7	nsv907754	chr17:17573539-17782404	Strong transcription Enhancers Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	78 gene(s)	inside rSNPs	diseases
8	nsv1061126	chr17:17578826-17803194	Strong transcription Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
9	nsv543238	chr17:17578826-17803194	Flanking Active TSS Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
10	nsv833385	chr17:17594037-17765578	Enhancers Genic enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
11	nsv1058884	chr17:17594370-17803194	Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
12	nsv543240	chr17:17594370-17803194	Genic enhancers Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
13	nsv543241	chr17:17596222-17703059	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
14	nsv1064176	chr17:17596222-17803194	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
15	nsv543242	chr17:17596222-17803194	Enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
16	nsv1062361	chr17:17598407-17746899	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	73 gene(s)	inside rSNPs	diseases
17	nsv543243	chr17:17598407-17746899	Genic enhancers Enhancers Bivalent Enhancer Active TSS Weak transcription Bivalent/Poised TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	73 gene(s)	inside rSNPs	diseases
18	nsv907756	chr17:17619859-17747289	Enhancers Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
19	nsv522668	chr17:17619859-17752809	Flanking Active TSS Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
20	nsv907757	chr17:17619859-17752809	Flanking Bivalent TSS/Enh Active TSS Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
21	nsv907758	chr17:17619859-17782404	Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	72 gene(s)	inside rSNPs	diseases
22	nsv907759	chr17:17619859-17802478	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
23	nsv532109	chr17:17630064-17700497	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
24	nsv1059949	chr17:17632590-17803194	Enhancers Genic enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
25	nsv543244	chr17:17632590-17803194	Weak transcription Flanking Active TSS Active TSS Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
26	nsv907760	chr17:17649423-17782404	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	72 gene(s)	inside rSNPs	diseases
27	nsv907761	chr17:17649423-17802478	Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
28	nsv916653	chr17:17651916-18454952	Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
29	nsv907762	chr17:17668071-17802478	Weak transcription Genic enhancers Active TSS Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	72 gene(s)	inside rSNPs	diseases
30	esv1804029	chr17:17669662-17714250	Flanking Active TSS Genic enhancers Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
31	nsv907763	chr17:17673824-17749822	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
32	nsv907764	chr17:17673824-17754633	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
33	nsv907765	chr17:17682484-17802478	Active TSS Strong transcription Enhancers Genic enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	72 gene(s)	inside rSNPs	diseases
34	nsv907766	chr17:17682484-17957348	Enhancers Strong transcription Flanking Active TSS Genic enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
35	esv3439095	chr17:17685252-17688100	Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:17678200-17687600	Weak transcription	Hela-S3	cervix
2	chr17:17682200-17687200	Weak transcription	HSMMtube	muscle
3	chr17:17684200-17687600	Active TSS	ES-I3 Cell Line	embryonic stem cell
4	chr17:17684200-17688000	Active TSS	H9 Cell Line	embryonic stem cell
5	chr17:17684200-17688000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
6	chr17:17684200-17688200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr17:17684400-17686800	Weak transcription	Fetal Kidney	kidney
8	chr17:17684400-17687200	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr17:17684400-17687200	Flanking Active TSS	HMEC	breast
10	chr17:17684400-17688200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr17:17684600-17687800	Flanking Active TSS	Primary hematopoietic stem cells	blood
12	chr17:17684800-17687400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
13	chr17:17684800-17687400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr17:17684800-17687600	Active TSS	HUES6 Cell Line	embryonic stem cell
15	chr17:17684800-17687600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr17:17684800-17687800	Active TSS	iPS-15b Cell Line	embryonic stem cell
17	chr17:17684800-17688400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr17:17685000-17687000	Active TSS	Breast Myoepithelial Primary Cells	Breast
19	chr17:17685000-17687000	Active TSS	Primary T helper naive cells fromperipheralblood	blood
20	chr17:17685000-17687200	Active TSS	Primary T cells from cord blood	blood
21	chr17:17685000-17687400	Flanking Active TSS	HUVEC	blood vessel
22	chr17:17685000-17687600	Active TSS	Aorta	Aorta
23	chr17:17685000-17687600	Active TSS	Pancreatic Islets	Pancreatic Islet
24	chr17:17685000-17687600	Active TSS	Ovary	ovary
25	chr17:17685000-17687800	Flanking Active TSS	Colonic Mucosa	Colon
26	chr17:17685000-17688000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
27	chr17:17685200-17686800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr17:17685200-17686800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr17:17685200-17686800	Active TSS	Brain Hippocampus Middle	brain
30	chr17:17685200-17686800	Active TSS	Right Atrium	heart
31	chr17:17685200-17686800	Active TSS	Osteobl	bone
32	chr17:17685200-17687000	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr17:17685200-17687000	Active TSS	Primary T helper 17 cells PMA-I stimulated	--
34	chr17:17685200-17687000	Active TSS	Psoas Muscle	Psoas
35	chr17:17685200-17687000	Active TSS	Skeletal Muscle Female	skeletal muscle
36	chr17:17685200-17687000	Active TSS	HepG2	liver
37	chr17:17685200-17687000	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
38	chr17:17685200-17687200	Flanking Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr17:17685200-17687200	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr17:17685200-17687200	Active TSS	Brain Angular Gyrus	brain
41	chr17:17685200-17687200	Active TSS	Brain Cingulate Gyrus	brain
42	chr17:17685200-17687200	Active TSS	Colon Smooth Muscle	Colon
43	chr17:17685200-17687400	Active TSS	Brain Anterior Caudate	brain
44	chr17:17685200-17687400	Active TSS	Brain Inferior Temporal Lobe	brain
45	chr17:17685200-17687400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
46	chr17:17685200-17687400	Active TSS	Brain Substantia Nigra	brain
47	chr17:17685200-17687400	Active TSS	Fetal Brain Female	brain
48	chr17:17685200-17687400	Active TSS	Rectal Smooth Muscle	rectum
49	chr17:17685200-17687400	Active TSS	Right Ventricle	heart
50	chr17:17685200-17687600	Flanking Active TSS	NH-A	brain

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