Variant report

Variant	rs573452674
Chromosome Location	chr7:126962010-126962011
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889189	chr7:126699088-126963028	Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv967497	chr7:126958676-126966982	Enhancers Active TSS Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:126961000-126962400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
2	chr7:126961400-126962600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
3	chr7:126961600-126963400	Enhancers	Primary T helper cells PMA-I stimulated	--
4	chr7:126961600-126963600	Enhancers	Primary T helper naive cells from peripheral blood	blood
5	chr7:126961800-126962800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
6	chr7:126961800-126963600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
7	chr7:126962000-126963000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
8	chr7:126962000-126963200	Enhancers	Primary T regulatory cells fromperipheralblood	blood
9	chr7:126962000-126963600	Enhancers	Primary T helper cells fromperipheralblood	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links