The 2.0 version of rSNPBase

Variant report

Variant rs573456934
Chromosome Location chr1:214706125-214706126
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214688400-214706200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:214688400-214710600 Weak transcription Spleen Spleen
3 chr1:214692400-214710600 Weak transcription HUVEC blood vessel
4 chr1:214694400-214706400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:214698800-214710800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr1:214699200-214706200 Weak transcription H1 Cell Line embryonic stem cell
7 chr1:214699200-214706200 Weak transcription Esophagus oesophagus
8 chr1:214699200-214711400 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr1:214699200-214711600 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr1:214699200-214722000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr1:214699200-214722400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr1:214699800-214715200 Weak transcription Stomach Mucosa stomach
13 chr1:214700800-214706400 Weak transcription Left Ventricle heart
14 chr1:214700800-214711400 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr1:214701200-214710400 Weak transcription Adipose Nuclei Adipose
16 chr1:214701200-214710800 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr1:214701200-214710800 Weak transcription NH-A brain
18 chr1:214701200-214719000 Weak transcription Hela-S3 cervix
19 chr1:214701400-214710600 Weak transcription NHDF-Ad bronchial
20 chr1:214701600-214710400 Weak transcription A549 lung
21 chr1:214702200-214706800 Weak transcription Fetal Intestine Large intestine
22 chr1:214702800-214718800 Weak transcription Aorta Aorta
23 chr1:214703000-214710600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr1:214703000-214711600 Weak transcription Psoas Muscle Psoas
25 chr1:214703600-214706600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:214703600-214710400 Weak transcription Small Intestine intestine
27 chr1:214703800-214711800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:214704000-214707000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:214704200-214711600 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr1:214704600-214706800 Strong transcription HSMM muscle
31 chr1:214704800-214706600 Strong transcription Muscle Satellite Cultured Cells --
32 chr1:214704800-214706800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:214704800-214706800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:214704800-214707000 Strong transcription HMEC breast
35 chr1:214704800-214707000 Strong transcription NHEK skin
36 chr1:214705000-214706800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr1:214705000-214710600 Weak transcription Fetal Lung lung
38 chr1:214705200-214706400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr1:214705200-214706400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:214705200-214707000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr1:214705200-214710600 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr1:214705400-214706600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr1:214705400-214706600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr1:214705400-214706600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr1:214705400-214706600 Strong transcription Fetal Intestine Small intestine
46 chr1:214705400-214706600 Strong transcription Right Ventricle heart
47 chr1:214705400-214706800 Strong transcription HUES6 Cell Line embryonic stem cell
48 chr1:214705400-214706800 Strong transcription Fetal Stomach stomach
49 chr1:214705400-214706800 Strong transcription NHLF lung
50 chr1:214705400-214706800 Strong transcription Osteobl bone

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Last update: Aug 31, 2015