| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv877017 |
chr3:77881397-78670654 |
Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv529995 |
chr3:78188643-78739698 |
Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv460726 |
chr3:78295664-78455767 |
Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
7 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv590733 |
chr3:78295664-78455767 |
Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
7 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv470661 |
chr3:78322882-78459350 |
Strong transcription Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers
|
Chromatin interactive regionlncRNA
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv877018 |
chr3:78420818-78472085 |
ZNF genes & repeats Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
