Variant report

Variant rs573493518
Chromosome Location chr1:247293472-247293473
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:247288800-247294200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:247289200-247294400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr1:247289400-247293600 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr1:247291200-247293600 Weak transcription Primary T cells fromperipheralblood blood
5 chr1:247291200-247294400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:247291200-247294400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:247291400-247293600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:247291400-247293600 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr1:247291400-247293600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr1:247291400-247293600 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr1:247291400-247293600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr1:247291400-247293600 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr1:247291400-247293600 Weak transcription Fetal Kidney kidney
14 chr1:247291400-247294000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:247291400-247294200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:247291400-247294200 Weak transcription Fetal Stomach stomach
17 chr1:247291400-247294400 Weak transcription H9 Cell Line embryonic stem cell
18 chr1:247291400-247294400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr1:247291400-247294400 Weak transcription Primary B cells from cord blood blood
20 chr1:247291400-247294400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:247291400-247294400 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr1:247291400-247294600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:247291400-247294800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr1:247291400-247294800 Weak transcription Fetal Lung lung
25 chr1:247291400-247294800 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr1:247291400-247295200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:247291400-247295200 Weak transcription Stomach Smooth Muscle stomach
28 chr1:247291400-247297800 Weak transcription Psoas Muscle Psoas
29 chr1:247291600-247293600 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr1:247291600-247293600 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr1:247291600-247293600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:247291600-247293600 Weak transcription Fetal Thymus thymus
33 chr1:247291600-247293800 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr1:247291600-247293800 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr1:247291600-247294000 Weak transcription Duodenum Mucosa Duodenum
36 chr1:247291600-247294000 Weak transcription Fetal Intestine Large intestine
37 chr1:247291600-247294200 Weak transcription HSMMtube muscle
38 chr1:247291600-247294400 Weak transcription Thymus Thymus
39 chr1:247291600-247294400 Weak transcription HepG2 liver
40 chr1:247291600-247294800 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr1:247291600-247295200 Weak transcription Brain Angular Gyrus brain
42 chr1:247292200-247293600 Weak transcription Dnd41 blood
43 chr1:247292200-247294400 Weak transcription Pancreas Pancrea
44 chr1:247293000-247293600 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr1:247293000-247293600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:247293200-247293600 Strong transcription A549 lung
47 chr1:247293200-247294000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
48 chr1:247293200-247294600 Weak transcription Right Ventricle heart
49 chr1:247293200-247295400 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
50 chr1:247293200-247295600 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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