Variant report

Variant rs573537194
Chromosome Location chr18:9613170-9613171
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:9553800-9613600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr18:9594200-9613600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr18:9597400-9613200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr18:9607200-9613400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr18:9608200-9613600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr18:9609400-9613600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr18:9609600-9613200 Weak transcription Thymus Thymus
8 chr18:9609600-9613400 Weak transcription H9 Cell Line embryonic stem cell
9 chr18:9611200-9613400 Weak transcription Pancreas Pancrea
10 chr18:9611400-9613400 Enhancers Primary T killer naive cells fromperipheralblood blood
11 chr18:9611400-9613600 Weak transcription Lung lung
12 chr18:9611600-9613200 Weak transcription Brain Inferior Temporal Lobe brain
13 chr18:9611600-9613400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr18:9611600-9613400 Weak transcription Psoas Muscle Psoas
15 chr18:9611600-9613600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr18:9611600-9613600 Weak transcription Gastric stomach
17 chr18:9611600-9613800 Weak transcription Spleen Spleen
18 chr18:9611800-9613200 Weak transcription Placenta Placenta
19 chr18:9611800-9613400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr18:9611800-9613400 Weak transcription Fetal Muscle Trunk muscle
21 chr18:9612000-9613200 Enhancers Primary T helper 17 cells PMA-I stimulated --
22 chr18:9612000-9613200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
23 chr18:9612000-9613200 Transcr. at gene 5' and 3' NHEK skin
24 chr18:9612000-9613400 Enhancers Primary monocytes fromperipheralblood blood
25 chr18:9612000-9613600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
26 chr18:9612000-9615000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr18:9612200-9613200 Enhancers Primary T killer memory cells from peripheral blood blood
28 chr18:9612200-9613200 Enhancers Brain Substantia Nigra brain
29 chr18:9612200-9613200 Enhancers Rectal Mucosa Donor 31 rectum
30 chr18:9612200-9613400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
31 chr18:9612200-9613400 Enhancers Primary T helper naive cells fromperipheralblood blood
32 chr18:9612200-9613400 Enhancers Primary T helper cells fromperipheralblood blood
33 chr18:9612200-9613400 Enhancers Liver Liver
34 chr18:9612200-9613400 Flanking Active TSS Brain Germinal Matrix brain
35 chr18:9612200-9613400 Enhancers Fetal Adrenal Gland Adrenal Gland
36 chr18:9612200-9613400 Flanking Active TSS GM12878-XiMat blood
37 chr18:9612200-9613400 Flanking Active TSS Hela-S3 cervix
38 chr18:9612200-9613400 Flanking Active TSS HUVEC blood vessel
39 chr18:9612200-9613600 Enhancers Primary B cells from peripheral blood blood
40 chr18:9612200-9615200 Active TSS NHLF lung
41 chr18:9612400-9613200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr18:9612400-9613200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
43 chr18:9612400-9613200 Enhancers Primary T helper naive cells from peripheral blood blood
44 chr18:9612400-9613200 Enhancers Brain Cingulate Gyrus brain
45 chr18:9612400-9613200 Flanking Active TSS Colon Smooth Muscle Colon
46 chr18:9612400-9613200 Flanking Active TSS Pancreatic Islets Pancreatic Islet
47 chr18:9612400-9613200 Enhancers Skeletal Muscle Male skeletal muscle
48 chr18:9612400-9613400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr18:9612400-9613400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr18:9612400-9613400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain

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