| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv430505 |
chr12:42297931-42720773 |
Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
38 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1048971 |
chr12:42651976-42801204 |
Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1044790 |
chr12:42672255-43344184 |
Enhancers Bivalent Enhancer Strong transcription Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
29 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv541483 |
chr12:42672255-43344184 |
Active TSS Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
29 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv973058 |
chr12:42680924-42683836 |
Enhancers
|
lncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
esv1809322 |
chr12:42682065-42699107 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
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Last update: Aug 31, 2015