The 2.0 version of rSNPBase

Variant report

Variant rs573567330
Chromosome Location chr3:23121725-23121726
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23118600-23123000 Weak transcription Aorta Aorta
2 chr3:23119000-23122200 Enhancers ES-I3 Cell Line embryonic stem cell
3 chr3:23119200-23122000 Enhancers iPS-18 Cell Line embryonic stem cell
4 chr3:23119400-23122000 Enhancers H1 Cell Line embryonic stem cell
5 chr3:23119400-23122000 Enhancers H9 Cell Line embryonic stem cell
6 chr3:23119400-23122000 Enhancers iPS-20b Cell Line embryonic stem cell
7 chr3:23119600-23122200 Enhancers iPS-15b Cell Line embryonic stem cell
8 chr3:23120000-23122000 Enhancers HUES64 Cell Line embryonic stem cell
9 chr3:23120800-23121800 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
10 chr3:23120800-23122000 Enhancers Fetal Heart heart
11 chr3:23121000-23121800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
12 chr3:23121000-23121800 Enhancers Primary B cells from peripheral blood blood
13 chr3:23121000-23122000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr3:23121000-23122000 Enhancers Fetal Muscle Leg muscle
15 chr3:23121000-23122000 Enhancers Pancreas Pancrea
16 chr3:23121000-23122000 Enhancers HSMM muscle
17 chr3:23121200-23121800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr3:23121200-23121800 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr3:23121200-23121800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
20 chr3:23121200-23121800 Enhancers Stomach Mucosa stomach
21 chr3:23121200-23122000 Active TSS Duodenum Mucosa Duodenum
22 chr3:23121200-23122000 Active TSS Rectal Mucosa Donor 29 rectum
23 chr3:23121200-23122000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
24 chr3:23121200-23122000 Flanking Active TSS A549 lung
25 chr3:23121200-23122000 Flanking Active TSS HSMMtube muscle
26 chr3:23121400-23121800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
27 chr3:23121400-23121800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr3:23121400-23121800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr3:23121400-23121800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr3:23121400-23121800 Flanking Active TSS Adipose Nuclei Adipose
31 chr3:23121400-23121800 Enhancers Liver Liver
32 chr3:23121400-23121800 Active TSS Esophagus oesophagus
33 chr3:23121400-23121800 Enhancers Fetal Kidney kidney
34 chr3:23121400-23121800 Active TSS Pancreatic Islets Pancreatic Islet
35 chr3:23121400-23121800 Enhancers Ovary ovary
36 chr3:23121400-23121800 Enhancers Psoas Muscle Psoas
37 chr3:23121400-23121800 Active TSS HMEC breast
38 chr3:23121400-23121800 Flanking Active TSS NHEK skin
39 chr3:23121400-23122000 Enhancers Fetal Lung lung
40 chr3:23121400-23122000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
41 chr3:23121400-23122000 Flanking Active TSS Hela-S3 cervix
42 chr3:23121600-23121800 Active TSS Breast Myoepithelial Primary Cells Breast
43 chr3:23121600-23121800 Active TSS Muscle Satellite Cultured Cells --
44 chr3:23121600-23121800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr3:23121600-23121800 Flanking Active TSS Colon Smooth Muscle Colon
46 chr3:23121600-23121800 Flanking Active TSS Duodenum Smooth Muscle Duodenum
47 chr3:23121600-23121800 Active TSS Stomach Smooth Muscle stomach
48 chr3:23121600-23121800 Enhancers Thymus Thymus
49 chr3:23121600-23121800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
50 chr3:23121600-23121800 Enhancers NHLF lung

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Last update: Aug 31, 2015