Variant report

Variant	rs573595830
Chromosome Location	chr4:15739327-15739328
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:15655679..15657937-chr4:15737188..15739918,2	K562	blood:

Variant related genes	Relation type
ENSG00000118564	Chromatin interaction

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3448986	chr4:14928802-15805558	Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
2	esv2757923	chr4:15444617-15749520	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
3	esv2759227	chr4:15444617-15749520	Strong transcription Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
4	nsv428439	chr4:15556961-15749520	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
5	nsv1012988	chr4:15597510-16091527	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
6	esv3467783	chr4:15739200-15739438	Enhancers Weak transcription Strong transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	esv3467784	chr4:15739214-15739437	Strong transcription Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:15707400-15742800	Weak transcription	Primary B cells from cord blood	blood
2	chr4:15708800-15739400	Weak transcription	Ovary	ovary
3	chr4:15723000-15743000	Strong transcription	Monocytes-CD14+_RO01746	blood
4	chr4:15723000-15744600	Strong transcription	Primary neutrophils fromperipheralblood	blood
5	chr4:15726000-15740200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr4:15727400-15740400	Weak transcription	Fetal Intestine Large	intestine
7	chr4:15729000-15743200	Weak transcription	Duodenum Mucosa	Duodenum
8	chr4:15733600-15742800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr4:15735400-15742800	Weak transcription	Primary hematopoietic stem cells	blood
10	chr4:15735800-15740200	Strong transcription	Primary monocytes fromperipheralblood	blood
11	chr4:15737800-15740400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr4:15738400-15742600	Enhancers	Dnd41	blood
13	chr4:15738600-15739400	Enhancers	Thymus	Thymus
14	chr4:15738800-15739800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
15	chr4:15739000-15739400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr4:15739000-15739400	Enhancers	Fetal Thymus	thymus
17	chr4:15739000-15739600	Enhancers	Primary T helper cells PMA-I stimulated	--
18	chr4:15739000-15739800	Strong transcription	Fetal Intestine Small	intestine
19	chr4:15739200-15739400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr4:15739200-15739600	Enhancers	Primary T cells fromperipheralblood	blood

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