The 2.0 version of rSNPBase

Variant report

Variant rs57367947
Chromosome Location chr3:195126594-195126595
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195041000-195131200 Weak transcription Gastric stomach
2 chr3:195078000-195142200 Weak transcription Brain Inferior Temporal Lobe brain
3 chr3:195087800-195131200 Weak transcription NHDF-Ad bronchial
4 chr3:195088600-195146800 Weak transcription Spleen Spleen
5 chr3:195094800-195161200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr3:195095200-195161800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr3:195095800-195134200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr3:195102600-195129800 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr3:195106600-195137800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr3:195107400-195126600 Weak transcription Esophagus oesophagus
11 chr3:195108800-195134000 Weak transcription Placenta Placenta
12 chr3:195109400-195144000 Weak transcription Fetal Muscle Leg muscle
13 chr3:195109800-195131200 Weak transcription Fetal Intestine Large intestine
14 chr3:195111800-195128400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr3:195112400-195126600 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr3:195112600-195132400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr3:195112600-195138000 Weak transcription Thymus Thymus
18 chr3:195112600-195141400 Weak transcription Fetal Stomach stomach
19 chr3:195114000-195129000 Weak transcription Right Atrium heart
20 chr3:195115400-195134200 Weak transcription Lung lung
21 chr3:195115600-195131600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr3:195115600-195132400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr3:195115600-195139200 Weak transcription Psoas Muscle Psoas
24 chr3:195116200-195143600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr3:195116400-195147600 Weak transcription Fetal Intestine Small intestine
26 chr3:195117200-195133400 Weak transcription Liver Liver
27 chr3:195118200-195144200 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr3:195118800-195131200 Weak transcription Fetal Lung lung
29 chr3:195118800-195142200 Weak transcription Brain Cingulate Gyrus brain
30 chr3:195119400-195128600 Enhancers Primary T helper cells PMA-I stimulated --
31 chr3:195120000-195129400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr3:195121600-195128800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr3:195121800-195127200 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr3:195121800-195128600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr3:195121800-195131200 Weak transcription K562 blood
36 chr3:195122400-195126600 Enhancers Primary B cells from peripheral blood blood
37 chr3:195122400-195128000 Weak transcription Primary T cells fromperipheralblood blood
38 chr3:195122600-195126600 Weak transcription GM12878-XiMat blood
39 chr3:195123000-195126600 Weak transcription Primary hematopoietic stem cells blood
40 chr3:195123000-195128400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr3:195123000-195132600 Weak transcription Right Ventricle heart
42 chr3:195123200-195127200 Weak transcription Small Intestine intestine
43 chr3:195123800-195127000 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr3:195123800-195129600 Weak transcription Brain Substantia Nigra brain
45 chr3:195123800-195146400 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr3:195124200-195128200 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr3:195124400-195128200 Weak transcription Primary T cells from cord blood blood
48 chr3:195124400-195131000 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr3:195124600-195126600 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr3:195124600-195131200 Weak transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015