Variant report

Variant	rs573886356
Chromosome Location	chr4:84970866-84970867
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879512	chr4:84374692-85090749	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
2	nsv916422	chr4:84965304-85145657	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv1387720	chr4:84970865-84970867	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
4	nsv294760	chr4:84970866-84970867	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:84970400-84971400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr4:84970400-84971600	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr4:84970600-84973800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr4:84970800-84971400	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr4:84970800-84973800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr4:84970800-84973800	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr4:84970800-84973800	Enhancers	HUES64 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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