Variant report

Variant rs573901095
Chromosome Location chr17:17685634-17685635
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17678200-17687600 Weak transcription Hela-S3 cervix
2 chr17:17682200-17687200 Weak transcription HSMMtube muscle
3 chr17:17683600-17685800 Enhancers Fetal Brain Male brain
4 chr17:17683600-17686200 Enhancers Liver Liver
5 chr17:17683800-17686000 Enhancers Spleen Spleen
6 chr17:17683800-17686200 Enhancers GM12878-XiMat blood
7 chr17:17684000-17685800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
8 chr17:17684000-17686200 Enhancers Lung lung
9 chr17:17684200-17685800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
10 chr17:17684200-17687600 Active TSS ES-I3 Cell Line embryonic stem cell
11 chr17:17684200-17688000 Active TSS H9 Cell Line embryonic stem cell
12 chr17:17684200-17688000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
13 chr17:17684200-17688200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr17:17684400-17686200 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
15 chr17:17684400-17686800 Weak transcription Fetal Kidney kidney
16 chr17:17684400-17687200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
17 chr17:17684400-17687200 Flanking Active TSS HMEC breast
18 chr17:17684400-17688200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr17:17684600-17686200 Bivalent Enhancer Stomach Mucosa stomach
20 chr17:17684600-17687800 Flanking Active TSS Primary hematopoietic stem cells blood
21 chr17:17684800-17685800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
22 chr17:17684800-17686200 Weak transcription K562 blood
23 chr17:17684800-17687400 Active TSS ES-WA7 Cell Line embryonic stem cell
24 chr17:17684800-17687400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr17:17684800-17687600 Active TSS HUES6 Cell Line embryonic stem cell
26 chr17:17684800-17687600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
27 chr17:17684800-17687800 Active TSS iPS-15b Cell Line embryonic stem cell
28 chr17:17684800-17688400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr17:17685000-17686000 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
30 chr17:17685000-17686000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
31 chr17:17685000-17686200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
32 chr17:17685000-17686200 Flanking Bivalent TSS/Enh Thymus Thymus
33 chr17:17685000-17687000 Active TSS Breast Myoepithelial Primary Cells Breast
34 chr17:17685000-17687000 Active TSS Primary T helper naive cells fromperipheralblood blood
35 chr17:17685000-17687200 Active TSS Primary T cells from cord blood blood
36 chr17:17685000-17687400 Flanking Active TSS HUVEC blood vessel
37 chr17:17685000-17687600 Active TSS Aorta Aorta
38 chr17:17685000-17687600 Active TSS Pancreatic Islets Pancreatic Islet
39 chr17:17685000-17687600 Active TSS Ovary ovary
40 chr17:17685000-17687800 Flanking Active TSS Colonic Mucosa Colon
41 chr17:17685000-17688000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
42 chr17:17685200-17685800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
43 chr17:17685200-17685800 Flanking Active TSS Adipose Nuclei Adipose
44 chr17:17685200-17685800 Enhancers Sigmoid Colon Sigmoid Colon
45 chr17:17685200-17686000 Active TSS A549 lung
46 chr17:17685200-17686200 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr17:17685200-17686200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
48 chr17:17685200-17686200 Weak transcription Gastric stomach
49 chr17:17685200-17686200 Weak transcription NHDF-Ad bronchial
50 chr17:17685200-17686400 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood

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