Variant report

Variant	rs573933231
Chromosome Location	chr8:67987385-67987386
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:67981900..67985386-chr8:67987036..67990372,4	K562	blood:
2	chr8:67981584..67984987-chr8:67987255..67990503,3	MCF-7	breast:
3	chr8:67985384..67988219-chr8:68025028..68027428,3	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016742	chr8:67917418-68125319	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
2	nsv539639	chr8:67917418-68125319	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
3	nsv890975	chr8:67983796-68032058	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv611458	chr8:67986890-68016482	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:120 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67977600-67989400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr8:67977600-67989600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr8:67977600-67998200	Weak transcription	Gastric	stomach
4	chr8:67977800-67987400	Weak transcription	Primary B cells from cord blood	blood
5	chr8:67977800-67987400	Weak transcription	Rectal Mucosa Donor 29	rectum
6	chr8:67977800-68009200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr8:67977800-68010000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
8	chr8:67977800-68013800	Weak transcription	Primary neutrophils fromperipheralblood	blood
9	chr8:67977800-68021800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr8:67977800-68044000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
11	chr8:67978000-67987400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
12	chr8:67978000-67987600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
13	chr8:67978000-67989400	Weak transcription	Small Intestine	intestine
14	chr8:67978000-67995400	Weak transcription	Colonic Mucosa	Colon
15	chr8:67978000-67996800	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr8:67978000-68012200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr8:67978200-67987400	Weak transcription	Adipose Nuclei	Adipose
18	chr8:67978200-67987400	Weak transcription	Sigmoid Colon	Sigmoid Colon
19	chr8:67978200-67987400	Weak transcription	Monocytes-CD14+_RO01746	blood
20	chr8:67978200-67987800	Weak transcription	Primary T helper cells PMA-I stimulated	--
21	chr8:67978200-67987800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
22	chr8:67978200-67987800	Weak transcription	Lung	lung
23	chr8:67978200-67989000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr8:67978200-67990600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr8:67978200-67992000	Weak transcription	Aorta	Aorta
26	chr8:67978200-67992600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr8:67978200-68006000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
28	chr8:67978200-68012600	Weak transcription	HUVEC	blood vessel
29	chr8:67978200-68074400	Weak transcription	Esophagus	oesophagus
30	chr8:67978400-67987400	Weak transcription	Primary hematopoietic stem cells	blood
31	chr8:67978400-67987400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
32	chr8:67978400-67987400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr8:67978400-67987400	Weak transcription	Fetal Brain Male	brain
34	chr8:67978400-67987400	Weak transcription	Fetal Kidney	kidney
35	chr8:67978400-67987400	Weak transcription	Rectal Mucosa Donor 31	rectum
36	chr8:67978400-67989400	Weak transcription	Cortex derived primary cultured neurospheres	brain
37	chr8:67978400-67989800	Weak transcription	Stomach Smooth Muscle	stomach
38	chr8:67978400-68044800	Weak transcription	Brain Angular Gyrus	brain
39	chr8:67978400-68045600	Weak transcription	Placenta Amnion	Placenta Amnion
40	chr8:67978600-67987400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
41	chr8:67978600-67987400	Weak transcription	Primary T cells from cord blood	blood
42	chr8:67978600-67987400	Weak transcription	Skeletal Muscle Male	skeletal muscle
43	chr8:67978600-67987400	Weak transcription	HMEC	breast
44	chr8:67978600-67987600	Weak transcription	Ovary	ovary
45	chr8:67978600-67987800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr8:67978600-67988200	Weak transcription	H1 Cell Line	embryonic stem cell
47	chr8:67978600-67990600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr8:67978600-67992200	Weak transcription	Osteobl	bone
49	chr8:67978600-67998000	Weak transcription	NHEK	skin
50	chr8:67978600-68007000	Weak transcription	Brain Substantia Nigra	brain

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