The 2.0 version of rSNPBase

Variant report

Variant rs573945627
Chromosome Location chr7:26139185-26139186
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:26119200-26141000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr7:26131800-26140400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr7:26135600-26139200 Enhancers Primary T helper cells PMA-I stimulated --
4 chr7:26136200-26139200 Enhancers Primary T killer naive cells fromperipheralblood blood
5 chr7:26136200-26140600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr7:26136200-26141000 Enhancers Primary T regulatory cells fromperipheralblood blood
7 chr7:26136400-26140400 Enhancers Primary monocytes fromperipheralblood blood
8 chr7:26136400-26142400 Enhancers Primary T cells fromperipheralblood blood
9 chr7:26136800-26139600 Enhancers Monocytes-CD14+_RO01746 blood
10 chr7:26137000-26140400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr7:26137600-26140000 Weak transcription Primary B cells from cord blood blood
12 chr7:26137600-26140600 Weak transcription Fetal Intestine Large intestine
13 chr7:26137600-26140800 Weak transcription HepG2 liver
14 chr7:26137800-26139400 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr7:26137800-26140400 Weak transcription Primary hematopoietic stem cells blood
16 chr7:26137800-26141000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr7:26137800-26141000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr7:26137800-26141000 Enhancers Primary T cells from cord blood blood
19 chr7:26137800-26141000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr7:26138000-26140000 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr7:26138000-26140400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr7:26138000-26140400 Weak transcription Primary neutrophils fromperipheralblood blood
23 chr7:26138000-26140600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr7:26138000-26140600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr7:26138000-26141000 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr7:26138000-26141000 Weak transcription Thymus Thymus
27 chr7:26138200-26139800 Weak transcription Primary B cells from peripheral blood blood
28 chr7:26138200-26140000 Weak transcription GM12878-XiMat blood
29 chr7:26138200-26140600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr7:26138200-26140600 Weak transcription Fetal Thymus thymus
31 chr7:26138200-26141400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr7:26138800-26139200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr7:26138800-26140000 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr7:26138800-26143600 Enhancers Placenta Placenta
35 chr7:26139000-26139200 Enhancers Primary T killer memory cells from peripheral blood blood
36 chr7:26139000-26140400 Enhancers Primary T helper naive cells from peripheral blood blood
37 chr7:26139000-26141000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015