Variant report

Variant	rs573957346
Chromosome Location	chr11:16302448-16302449
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529731	chr11:16122782-16468170	Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv897013	chr11:16206658-16307700	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv553565	chr11:16220289-16307700	Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv897015	chr11:16235962-16307700	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3335445	chr11:16301976-16306474	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:16286800-16314800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr11:16298600-16302800	Weak transcription	Pancreas	Pancrea
3	chr11:16300200-16313400	Weak transcription	Brain Germinal Matrix	brain
4	chr11:16300800-16314200	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr11:16301800-16302600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr11:16302000-16302800	Enhancers	Fetal Heart	heart
7	chr11:16302200-16302600	Flanking Active TSS	K562	blood
8	chr11:16302200-16309000	Weak transcription	Fetal Intestine Small	intestine
9	chr11:16302200-16314200	Weak transcription	Fetal Muscle Leg	muscle
10	chr11:16302200-16321600	Weak transcription	Left Ventricle	heart
11	chr11:16302400-16302600	Enhancers	Pancreatic Islets	Pancreatic Islet
12	chr11:16302400-16302600	Enhancers	HUVEC	blood vessel
13	chr11:16302400-16307600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr11:16302400-16309200	Weak transcription	Fetal Intestine Large	intestine

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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