Variant report

Variant	rs573967821
Chromosome Location	chr15:40785008-40785009
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34145	chr15:40549617-40889824	Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
2	esv3443211	chr15:40783910-40786008	Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv1493770	chr15:40785007-40785008	Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:40785000-40785200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
2	chr15:40785000-40785200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
3	chr15:40785000-40785400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr15:40785000-40785800	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
5	chr15:40785000-40786600	Enhancers	Primary T cells fromperipheralblood	blood
6	chr15:40785000-40786600	Enhancers	Dnd41	blood
7	chr15:40785000-40786800	Enhancers	Primary T helper cells PMA-I stimulated	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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