Variant report

Variant rs573968038
Chromosome Location chr4:1282906-1282907
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:1259400-1283000 Weak transcription Ovary ovary
2 chr4:1281000-1283000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr4:1282400-1283000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr4:1282400-1283000 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr4:1282400-1283000 Enhancers Primary T helper naive cells from peripheral blood blood
6 chr4:1282400-1283000 Enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr4:1282400-1283000 Enhancers Fetal Heart heart
8 chr4:1282400-1283000 Enhancers Left Ventricle heart
9 chr4:1282400-1283000 Enhancers Pancreas Pancrea
10 chr4:1282400-1283000 Enhancers Skeletal Muscle Male skeletal muscle
11 chr4:1282400-1283000 Enhancers Spleen Spleen
12 chr4:1282400-1283000 Flanking Active TSS Dnd41 blood
13 chr4:1282400-1285200 Active TSS H9 Cell Line embryonic stem cell
14 chr4:1282600-1283000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr4:1282600-1283000 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr4:1282600-1283000 Flanking Active TSS HUES64 Cell Line embryonic stem cell
17 chr4:1282600-1283000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
18 chr4:1282600-1283000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr4:1282600-1283000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr4:1282600-1283000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr4:1282600-1283000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr4:1282600-1283000 Enhancers Primary monocytes fromperipheralblood blood
23 chr4:1282600-1283000 Enhancers Primary B cells from peripheral blood blood
24 chr4:1282600-1283000 Enhancers Primary T cells fromperipheralblood blood
25 chr4:1282600-1283000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
26 chr4:1282600-1283000 Enhancers Primary T helper 17 cells PMA-I stimulated --
27 chr4:1282600-1283000 Enhancers Primary T regulatory cells fromperipheralblood blood
28 chr4:1282600-1283000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
29 chr4:1282600-1283000 Flanking Active TSS Brain Angular Gyrus brain
30 chr4:1282600-1283000 Enhancers Brain Hippocampus Middle brain
31 chr4:1282600-1283000 Enhancers Fetal Brain Male brain
32 chr4:1282600-1283000 Flanking Active TSS Fetal Brain Female brain
33 chr4:1282600-1283000 Enhancers Fetal Intestine Large intestine
34 chr4:1282600-1283000 Enhancers Fetal Stomach stomach
35 chr4:1282600-1283000 Weak transcription Lung lung
36 chr4:1282600-1283000 Enhancers Placenta Amnion Placenta Amnion
37 chr4:1282600-1283000 Enhancers Rectal Mucosa Donor 31 rectum
38 chr4:1282600-1283000 Enhancers Sigmoid Colon Sigmoid Colon
39 chr4:1282600-1283000 Flanking Active TSS NHEK skin
40 chr4:1282600-1283200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
41 chr4:1282600-1283200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
42 chr4:1282600-1283200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr4:1282600-1283200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr4:1282600-1283200 Flanking Active TSS Muscle Satellite Cultured Cells --
45 chr4:1282600-1283200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
46 chr4:1282600-1283200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
47 chr4:1282600-1283200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr4:1282600-1283400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
49 chr4:1282600-1283400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr4:1282600-1283600 Flanking Active TSS Primary hematopoietic stem cells blood

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