Variant report

Variant	rs573989181
Chromosome Location	chr3:144483926-144483927
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv591928	chr3:144050897-144822081	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv3357831	chr3:144433846-144790831	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv3405013	chr3:144433866-144790801	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv829746	chr3:144451478-144618224	Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv829747	chr3:144463330-144654092	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	esv275317	chr3:144482382-144486520	Weak transcription Active TSS Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	esv3349479	chr3:144483812-144486110	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:144482600-144484200	Active TSS	Brain Cingulate Gyrus	brain
2	chr3:144483200-144489200	Weak transcription	Psoas Muscle	Psoas
3	chr3:144483400-144487800	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr3:144483400-144489000	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr3:144483400-144489200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr3:144483400-144489200	Weak transcription	Brain Anterior Caudate	brain
7	chr3:144483400-144489400	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr3:144483600-144484000	Enhancers	Brain Hippocampus Middle	brain
9	chr3:144483600-144489400	Weak transcription	Brain Substantia Nigra	brain
10	chr3:144483800-144488000	Weak transcription	Skeletal Muscle Female	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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