Variant report

Variant rs57400664
Chromosome Location chr22:22306165-22306166
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22293000-22306200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr22:22293000-22306400 Weak transcription Small Intestine intestine
3 chr22:22300200-22306200 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr22:22300200-22306400 Weak transcription H9 Cell Line embryonic stem cell
5 chr22:22300400-22306200 Weak transcription Aorta Aorta
6 chr22:22300400-22306400 Weak transcription Thymus Thymus
7 chr22:22300800-22306200 Weak transcription Gastric stomach
8 chr22:22301800-22306200 Weak transcription Fetal Intestine Small intestine
9 chr22:22302000-22306200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr22:22302400-22306200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr22:22302800-22306200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr22:22303400-22306200 Weak transcription Esophagus oesophagus
13 chr22:22303600-22306800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
14 chr22:22304200-22306200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr22:22304600-22306200 Enhancers Cortex derived primary cultured neurospheres brain
16 chr22:22304600-22306200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr22:22304600-22306200 Weak transcription Left Ventricle heart
18 chr22:22304600-22306200 Weak transcription Psoas Muscle Psoas
19 chr22:22305000-22306200 Enhancers Placenta Placenta
20 chr22:22305400-22306200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr22:22305400-22306200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr22:22305400-22306200 Enhancers Primary T helper naive cells fromperipheralblood blood
23 chr22:22305400-22306200 Enhancers Primary mononuclear cells fromperipheralblood Blood
24 chr22:22305400-22306200 Active TSS Fetal Adrenal Gland Adrenal Gland
25 chr22:22305400-22306200 Transcr. at gene 5' and 3' Fetal Muscle Trunk muscle
26 chr22:22305400-22306400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
27 chr22:22305400-22306400 Enhancers Spleen Spleen
28 chr22:22305400-22306400 Flanking Active TSS HUVEC blood vessel
29 chr22:22305400-22306800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr22:22305400-22307200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
31 chr22:22305600-22306200 Enhancers Primary T cells fromperipheralblood blood
32 chr22:22305600-22306200 Enhancers Primary T helper cells PMA-I stimulated --
33 chr22:22305600-22306200 Enhancers Primary Natural Killer cells fromperipheralblood blood
34 chr22:22305600-22307400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr22:22305800-22306200 Active TSS Fetal Stomach stomach
36 chr22:22305800-22306400 Transcr. at gene 5' and 3' HSMM muscle
37 chr22:22306000-22306200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
38 chr22:22306000-22306200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr22:22306000-22306200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr22:22306000-22306200 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
41 chr22:22306000-22306200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
42 chr22:22306000-22306200 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
43 chr22:22306000-22306200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
44 chr22:22306000-22306200 Bivalent Enhancer iPS-20b Cell Line embryonic stem cell
45 chr22:22306000-22306200 Enhancers Primary B cells from peripheral blood blood
46 chr22:22306000-22306200 Enhancers Primary T regulatory cells fromperipheralblood blood
47 chr22:22306000-22306200 Enhancers Primary T killer naive cells fromperipheralblood blood
48 chr22:22306000-22306200 Enhancers Primary T killer memory cells from peripheral blood blood
49 chr22:22306000-22306200 Active TSS Brain Anterior Caudate brain
50 chr22:22306000-22306200 Active TSS Brain Cingulate Gyrus brain

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