Variant report

Variant rs574078002
Chromosome Location chr6:30852712-30852713
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30850000-30853000 Active TSS H9 Cell Line embryonic stem cell
2 chr6:30850200-30852800 Active TSS Gastric stomach
3 chr6:30850400-30852800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
4 chr6:30850400-30853000 Active TSS Breast Myoepithelial Primary Cells Breast
5 chr6:30850400-30853200 Active TSS Rectal Smooth Muscle rectum
6 chr6:30850600-30853000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr6:30850600-30853000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr6:30850600-30853200 Active TSS ES-I3 Cell Line embryonic stem cell
9 chr6:30850600-30854600 Active TSS Pancreatic Islets Pancreatic Islet
10 chr6:30850800-30854200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr6:30850800-30854400 Active TSS ES-WA7 Cell Line embryonic stem cell
12 chr6:30851000-30853000 Active TSS Small Intestine intestine
13 chr6:30851400-30852800 Active TSS HUES6 Cell Line embryonic stem cell
14 chr6:30851400-30852800 Active TSS iPS-15b Cell Line embryonic stem cell
15 chr6:30851400-30852800 Active TSS iPS-20b Cell Line embryonic stem cell
16 chr6:30851400-30853000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr6:30851400-30853000 Active TSS Esophagus oesophagus
18 chr6:30851400-30853400 Active TSS Fetal Kidney kidney
19 chr6:30851400-30854400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr6:30851600-30852800 Active TSS HUES48 Cell Line embryonic stem cell
21 chr6:30851600-30852800 Active TSS iPS-18 Cell Line embryonic stem cell
22 chr6:30851600-30852800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr6:30851600-30852800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr6:30851600-30852800 Active TSS Stomach Mucosa stomach
25 chr6:30851600-30853000 Active TSS HUES64 Cell Line embryonic stem cell
26 chr6:30851600-30853200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr6:30851600-30853200 Active TSS A549 lung
28 chr6:30851800-30852800 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr6:30851800-30852800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr6:30851800-30852800 Active TSS Primary T cells from cord blood blood
31 chr6:30851800-30852800 Active TSS Primary T helper memory cells from peripheral blood 2 blood
32 chr6:30851800-30852800 Active TSS Primary T killer memory cells from peripheral blood blood
33 chr6:30851800-30852800 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr6:30851800-30852800 Active TSS Muscle Satellite Cultured Cells --
35 chr6:30851800-30852800 Active TSS Brain Germinal Matrix brain
36 chr6:30851800-30852800 Active TSS Brain Inferior Temporal Lobe brain
37 chr6:30851800-30852800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
38 chr6:30851800-30852800 Active TSS Colon Smooth Muscle Colon
39 chr6:30851800-30852800 Active TSS Duodenum Smooth Muscle Duodenum
40 chr6:30851800-30852800 Active TSS Fetal Intestine Small intestine
41 chr6:30851800-30852800 Active TSS Placenta Amnion Placenta Amnion
42 chr6:30851800-30852800 Active TSS Psoas Muscle Psoas
43 chr6:30851800-30852800 Active TSS Rectal Mucosa Donor 29 rectum
44 chr6:30851800-30852800 Active TSS Hela-S3 cervix
45 chr6:30851800-30852800 Active TSS HMEC breast
46 chr6:30851800-30852800 Active TSS HSMM muscle
47 chr6:30851800-30852800 Active TSS NHLF lung
48 chr6:30851800-30853000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
49 chr6:30851800-30853000 Active TSS Brain Anterior Caudate brain
50 chr6:30851800-30853000 Active TSS Fetal Lung lung

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