Variant report

Variant	rs574125562
Chromosome Location	chr7:119811362-119811363
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831113	chr7:119683515-119886277	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv981852	chr7:119811053-119814989	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:119808600-119811400	Weak transcription	Adipose Nuclei	Adipose
2	chr7:119808600-119812400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr7:119808600-119820600	Weak transcription	NHLF	lung
4	chr7:119808800-119811600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr7:119809800-119812000	Enhancers	Muscle Satellite Cultured Cells	--
6	chr7:119810200-119812000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr7:119810600-119812400	Enhancers	NHEK	skin
8	chr7:119810800-119811800	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr7:119810800-119812000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr7:119810800-119812000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr7:119810800-119812000	Enhancers	HMEC	breast
12	chr7:119810800-119812400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr7:119811000-119811600	Enhancers	Colon Smooth Muscle	Colon
14	chr7:119811200-119811400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr7:119811200-119812000	Enhancers	HSMM	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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