Variant report

Variant rs57420699
Chromosome Location chr19:39380721-39380722
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39368800-39386400 Genic enhancers Fetal Muscle Trunk muscle
2 chr19:39369000-39384000 Weak transcription Right Atrium heart
3 chr19:39369000-39386400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr19:39369200-39382800 Weak transcription H9 Cell Line embryonic stem cell
5 chr19:39369200-39389200 Weak transcription A549 lung
6 chr19:39369400-39382800 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr19:39369400-39388800 Weak transcription Stomach Mucosa stomach
8 chr19:39370000-39385800 Strong transcription Fetal Stomach stomach
9 chr19:39371600-39389800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr19:39372200-39381000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr19:39372400-39388800 Weak transcription Fetal Kidney kidney
12 chr19:39376600-39381800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr19:39376600-39383600 Strong transcription Adipose Nuclei Adipose
14 chr19:39376600-39383800 Strong transcription Lung lung
15 chr19:39377000-39381400 Strong transcription Brain Angular Gyrus brain
16 chr19:39377200-39381400 Strong transcription Brain Inferior Temporal Lobe brain
17 chr19:39377200-39383600 Strong transcription Fetal Adrenal Gland Adrenal Gland
18 chr19:39377200-39388600 Weak transcription K562 blood
19 chr19:39377400-39381600 Strong transcription Brain Cingulate Gyrus brain
20 chr19:39377400-39386600 Strong transcription Fetal Intestine Small intestine
21 chr19:39377600-39381600 Strong transcription Brain Germinal Matrix brain
22 chr19:39377600-39381800 Strong transcription NHEK skin
23 chr19:39377800-39381600 Strong transcription Brain Anterior Caudate brain
24 chr19:39377800-39382400 Strong transcription Ovary ovary
25 chr19:39377800-39382800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr19:39377800-39383000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr19:39377800-39383400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr19:39377800-39383800 Strong transcription Colon Smooth Muscle Colon
29 chr19:39377800-39386400 Strong transcription Stomach Smooth Muscle stomach
30 chr19:39378000-39381800 Strong transcription Right Ventricle heart
31 chr19:39378000-39382000 Strong transcription Liver Liver
32 chr19:39378200-39380800 Strong transcription Brain Hippocampus Middle brain
33 chr19:39378400-39381400 Strong transcription HSMMtube muscle
34 chr19:39378400-39383800 Strong transcription Spleen Spleen
35 chr19:39378400-39386200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
36 chr19:39378600-39381000 Strong transcription Primary T cells fromperipheralblood blood
37 chr19:39378600-39384400 Strong transcription Primary monocytes fromperipheralblood blood
38 chr19:39378600-39384600 Strong transcription Monocytes-CD14+_RO01746 blood
39 chr19:39378600-39385200 Strong transcription Primary T regulatory cells fromperipheralblood blood
40 chr19:39378800-39380800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr19:39378800-39380800 Strong transcription Left Ventricle heart
42 chr19:39378800-39381000 Strong transcription Pancreas Pancrea
43 chr19:39378800-39381600 Strong transcription Sigmoid Colon Sigmoid Colon
44 chr19:39378800-39381800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr19:39378800-39381800 Strong transcription Fetal Thymus thymus
46 chr19:39378800-39382000 Strong transcription Duodenum Smooth Muscle Duodenum
47 chr19:39378800-39382400 Strong transcription Breast Myoepithelial Primary Cells Breast
48 chr19:39378800-39382600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr19:39378800-39382800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr19:39378800-39382800 Strong transcription Gastric stomach

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