The 2.0 version of rSNPBase

Variant report

Variant rs5743047
Chromosome Location chr2:190684668-190684669
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190649800-190713400 Weak transcription Gastric stomach
2 chr2:190650000-190688200 Weak transcription Placenta Amnion Placenta Amnion
3 chr2:190650400-190686800 Weak transcription Thymus Thymus
4 chr2:190650400-190688400 Weak transcription Colonic Mucosa Colon
5 chr2:190650400-190689800 Weak transcription Rectal Smooth Muscle rectum
6 chr2:190650400-190711400 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr2:190650600-190688800 Weak transcription Fetal Heart heart
8 chr2:190650600-190693200 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr2:190650600-190700400 Weak transcription Hela-S3 cervix
10 chr2:190656800-190685000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr2:190656800-190721000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr2:190658200-190743800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr2:190659000-190685000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr2:190659800-190686800 Weak transcription Fetal Stomach stomach
15 chr2:190659800-190743600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr2:190661400-190717800 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr2:190662600-190686800 Weak transcription Left Ventricle heart
18 chr2:190662800-190719000 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr2:190663000-190685600 Weak transcription Brain Anterior Caudate brain
20 chr2:190663000-190701600 Weak transcription Psoas Muscle Psoas
21 chr2:190663000-190712800 Weak transcription Aorta Aorta
22 chr2:190663200-190700600 Weak transcription Colon Smooth Muscle Colon
23 chr2:190663200-190712400 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr2:190664800-190686800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr2:190664800-190741800 Weak transcription Brain Angular Gyrus brain
26 chr2:190665000-190696600 Weak transcription H9 Cell Line embryonic stem cell
27 chr2:190667800-190686800 Weak transcription Pancreas Pancrea
28 chr2:190669400-190686800 Weak transcription Lung lung
29 chr2:190669400-190743800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr2:190669600-190709600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr2:190669600-190713200 Weak transcription Ovary ovary
32 chr2:190669800-190709000 Weak transcription Placenta Placenta
33 chr2:190670800-190712800 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr2:190671000-190719600 Weak transcription NH-A brain
35 chr2:190675400-190690200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr2:190675400-190693800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr2:190676200-190687400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr2:190676200-190712400 Weak transcription K562 blood
39 chr2:190676400-190690400 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr2:190676600-190686800 Weak transcription Esophagus oesophagus
41 chr2:190676800-190685800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr2:190677000-190709400 Weak transcription Fetal Intestine Small intestine
43 chr2:190677400-190685200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr2:190677400-190689800 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr2:190678400-190687200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr2:190680200-190687400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr2:190680400-190685800 Strong transcription Monocytes-CD14+_RO01746 blood
48 chr2:190681000-190743000 Weak transcription Brain Germinal Matrix brain
49 chr2:190681800-190685600 Strong transcription HUES64 Cell Line embryonic stem cell
50 chr2:190681800-190685800 Strong transcription Primary B cells from cord blood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015