Variant report

Variant rs57432974
Chromosome Location chr17:16462696-16462697
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:16447400-16463200 ZNF genes & repeats Liver Liver
2 chr17:16451200-16463200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr17:16452800-16463200 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr17:16452800-16463200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
5 chr17:16453600-16463200 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
6 chr17:16454400-16463200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
7 chr17:16454600-16463200 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr17:16454600-16467600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr17:16454800-16467600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
10 chr17:16455000-16463400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr17:16455000-16471200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr17:16455200-16463200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr17:16455200-16463200 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr17:16455200-16463200 ZNF genes & repeats Primary hematopoietic stem cells blood
15 chr17:16455200-16463200 ZNF genes & repeats Left Ventricle heart
16 chr17:16455400-16463200 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
17 chr17:16455400-16463200 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
18 chr17:16455400-16463400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
19 chr17:16455400-16468600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr17:16455600-16463200 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
21 chr17:16455600-16463200 ZNF genes & repeats Ovary ovary
22 chr17:16455600-16463200 ZNF genes & repeats A549 lung
23 chr17:16455600-16463200 ZNF genes & repeats Dnd41 blood
24 chr17:16455600-16463200 ZNF genes & repeats NHDF-Ad bronchial
25 chr17:16455800-16463200 ZNF genes & repeats Primary B cells from peripheral blood blood
26 chr17:16456400-16466600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr17:16456400-16467800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr17:16457200-16463000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr17:16458200-16463200 Strong transcription Rectal Smooth Muscle rectum
30 chr17:16458800-16471600 Weak transcription HUVEC blood vessel
31 chr17:16459000-16466200 Weak transcription Colonic Mucosa Colon
32 chr17:16459200-16463200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr17:16459200-16463200 Strong transcription Skeletal Muscle Female skeletal muscle
34 chr17:16459200-16467600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr17:16459600-16463200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr17:16459600-16471800 Weak transcription Stomach Mucosa stomach
37 chr17:16459800-16467400 Strong transcription Brain Germinal Matrix brain
38 chr17:16460000-16463200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
39 chr17:16460000-16463400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
40 chr17:16460200-16463200 Strong transcription Adipose Nuclei Adipose
41 chr17:16460200-16466200 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr17:16460400-16462800 Strong transcription Fetal Kidney kidney
43 chr17:16460400-16464800 Strong transcription Placenta Amnion Placenta Amnion
44 chr17:16460600-16463200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr17:16460600-16467600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr17:16460800-16463200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
47 chr17:16460800-16463200 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
48 chr17:16460800-16463200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
49 chr17:16460800-16463200 ZNF genes & repeats Fetal Muscle Leg muscle
50 chr17:16460800-16463200 ZNF genes & repeats HSMMtube muscle

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