Variant report

Variant rs5743312
Chromosome Location chr4:187000256-187000257
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:186989200-187000600 Weak transcription Spleen Spleen
2 chr4:186989800-187000400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr4:186990600-187000400 Weak transcription Gastric stomach
4 chr4:186990600-187006200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr4:186990600-187006200 Weak transcription Small Intestine intestine
6 chr4:186991000-187000400 Weak transcription Fetal Stomach stomach
7 chr4:186991000-187004200 Weak transcription Aorta Aorta
8 chr4:186991000-187006200 Weak transcription Colonic Mucosa Colon
9 chr4:186991200-187000600 Weak transcription Ovary ovary
10 chr4:186991200-187000800 Weak transcription Fetal Intestine Small intestine
11 chr4:186991200-187000800 Weak transcription Fetal Lung lung
12 chr4:186991200-187002600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr4:186991200-187003800 Weak transcription Primary hematopoietic stem cells blood
14 chr4:186991200-187005600 Weak transcription Right Ventricle heart
15 chr4:186991200-187007600 Weak transcription Rectal Smooth Muscle rectum
16 chr4:186991200-187009200 Weak transcription Lung lung
17 chr4:186991200-187009400 Weak transcription Brain Anterior Caudate brain
18 chr4:186991200-187009600 Weak transcription Fetal Kidney kidney
19 chr4:186991400-187002400 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr4:186991400-187002600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr4:186991400-187003600 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr4:186995600-187006400 Weak transcription Colon Smooth Muscle Colon
23 chr4:186995800-187002200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr4:186995800-187009200 Weak transcription Pancreas Pancrea
25 chr4:186999000-187001200 Enhancers iPS-18 Cell Line embryonic stem cell
26 chr4:186999200-187000800 Weak transcription Placenta Placenta
27 chr4:187000000-187000400 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr4:187000000-187000400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr4:187000000-187000400 Enhancers HUES48 Cell Line embryonic stem cell
30 chr4:187000000-187000400 Enhancers HUES6 Cell Line embryonic stem cell
31 chr4:187000000-187001200 Enhancers HUES64 Cell Line embryonic stem cell
32 chr4:187000000-187001200 Strong transcription Stomach Smooth Muscle stomach
33 chr4:187000000-187001600 Strong transcription Liver Liver
34 chr4:187000000-187002800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr4:187000200-187000400 Enhancers Brain Germinal Matrix brain
36 chr4:187000200-187000400 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr4:187000200-187000600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr4:187000200-187000600 Strong transcription Left Ventricle heart
39 chr4:187000200-187000600 Enhancers NHEK skin
40 chr4:187000200-187000800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr4:187000200-187001000 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
42 chr4:187000200-187001000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr4:187000200-187001000 Strong transcription Duodenum Smooth Muscle Duodenum
44 chr4:187000200-187001000 Enhancers Fetal Intestine Large intestine
45 chr4:187000200-187001200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr4:187000200-187001200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr4:187000200-187001200 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
48 chr4:187000200-187001200 Strong transcription Adipose Nuclei Adipose
49 chr4:187000200-187001200 Genic enhancers Esophagus oesophagus
50 chr4:187000200-187001200 Strong transcription Sigmoid Colon Sigmoid Colon

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