Variant report

Variant	rs574397400
Chromosome Location	chr8:119856846-119856847
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891414	chr8:119755490-119881550	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	nsv831444	chr8:119757355-119915966	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
3	nsv470234	chr8:119856209-119906530	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119854800-119857200	Enhancers	Hela-S3	cervix
2	chr8:119855000-119857000	Enhancers	HMEC	breast
3	chr8:119855200-119857000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr8:119855400-119857000	Enhancers	NH-A	brain
5	chr8:119855600-119857000	Enhancers	NHDF-Ad	bronchial
6	chr8:119856400-119857200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr8:119856600-119861200	Weak transcription	HSMMtube	muscle
8	chr8:119856600-119862200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr8:119856600-119862400	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr8:119856800-119857000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr8:119856800-119858000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr8:119856800-119858400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr8:119856800-119858400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr8:119856800-119858400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr8:119856800-119858400	Weak transcription	HSMM	muscle
16	chr8:119856800-119858600	Weak transcription	Osteobl	bone
17	chr8:119856800-119861800	Weak transcription	NHEK	skin
18	chr8:119856800-119862000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr8:119856800-119862200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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