Variant report

Variant rs574443939
Chromosome Location chr5:180210911-180210912
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180203000-180212400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr5:180204400-180215400 Weak transcription Primary B cells from cord blood blood
3 chr5:180205600-180211800 Weak transcription Liver Liver
4 chr5:180205800-180212400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr5:180206000-180212200 Weak transcription Lung lung
6 chr5:180206600-180212400 Weak transcription Aorta Aorta
7 chr5:180207000-180214600 Weak transcription Primary monocytes fromperipheralblood blood
8 chr5:180207200-180212200 Weak transcription Right Atrium heart
9 chr5:180207200-180212400 Weak transcription Fetal Intestine Large intestine
10 chr5:180208000-180212000 Weak transcription Stomach Smooth Muscle stomach
11 chr5:180208000-180212400 Weak transcription Psoas Muscle Psoas
12 chr5:180209200-180214000 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr5:180209200-180214800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr5:180209800-180211000 Enhancers Primary T cells fromperipheralblood blood
15 chr5:180209800-180212200 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr5:180209800-180213200 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr5:180210000-180211200 Enhancers K562 blood
18 chr5:180210000-180214000 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr5:180210000-180217800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr5:180210200-180211200 Enhancers Fetal Thymus thymus
21 chr5:180210200-180212400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr5:180210200-180212400 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr5:180210200-180217400 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr5:180210400-180211000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr5:180210400-180211000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr5:180210400-180211000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr5:180210400-180212200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr5:180210400-180212200 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr5:180210400-180212200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr5:180210400-180212400 Weak transcription Thymus Thymus
31 chr5:180210400-180214000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr5:180210400-180215000 Weak transcription Primary T cells from cord blood blood
33 chr5:180210600-180211000 Enhancers Placenta Amnion Placenta Amnion
34 chr5:180210600-180211600 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr5:180210600-180212200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr5:180210800-180211200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr5:180210800-180211200 Enhancers Esophagus oesophagus
38 chr5:180210800-180211200 Enhancers Placenta Placenta
39 chr5:180210800-180211200 Enhancers HSMMtube muscle
40 chr5:180210800-180211400 Enhancers Colonic Mucosa Colon
41 chr5:180210800-180211800 Enhancers HSMM muscle
42 chr5:180210800-180214000 Enhancers Fetal Muscle Trunk muscle
43 chr5:180210800-180214400 Weak transcription Monocytes-CD14+_RO01746 blood

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