Variant report
| Variant | rs574452526 |
|---|---|
| Chromosome Location | chr12:56121924-56121925 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:56116600-56122200 | Transcr. at gene 5' and 3' | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 2 | chr12:56116800-56122200 | Transcr. at gene 5' and 3' | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 3 | chr12:56117600-56122000 | Transcr. at gene 5' and 3' | Muscle Satellite Cultured Cells | -- |
| 4 | chr12:56117800-56122200 | Transcr. at gene 5' and 3' | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 5 | chr12:56118800-56122000 | Transcr. at gene 5' and 3' | NHLF | lung |
| 6 | chr12:56119800-56122000 | Transcr. at gene 5' and 3' | Stomach Smooth Muscle | stomach |
| 7 | chr12:56120400-56122000 | Transcr. at gene 5' and 3' | IMR90 fetal lung fibroblasts Cell Line | lung |
| 8 | chr12:56120400-56122000 | Transcr. at gene 5' and 3' | Fetal Intestine Small | intestine |
| 9 | chr12:56120400-56122000 | Transcr. at gene 5' and 3' | Rectal Smooth Muscle | rectum |
| 10 | chr12:56120400-56122000 | Transcr. at gene 5' and 3' | Skeletal Muscle Female | skeletal muscle |
| 11 | chr12:56120400-56122200 | Transcr. at gene 5' and 3' | Skeletal Muscle Male | skeletal muscle |
| 12 | chr12:56120600-56122000 | Transcr. at gene 5' and 3' | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 13 | chr12:56120600-56122000 | Transcr. at gene 5' and 3' | Fetal Muscle Trunk | muscle |
| 14 | chr12:56120600-56122000 | Transcr. at gene 5' and 3' | NHEK | skin |
| 15 | chr12:56120600-56122200 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 16 | chr12:56120800-56122000 | Flanking Active TSS | Brain Inferior Temporal Lobe | brain |
| 17 | chr12:56120800-56122000 | Transcr. at gene 5' and 3' | Colonic Mucosa | Colon |
| 18 | chr12:56120800-56122000 | Flanking Active TSS | Duodenum Mucosa | Duodenum |
| 19 | chr12:56120800-56122000 | Transcr. at gene 5' and 3' | Fetal Muscle Leg | muscle |
| 20 | chr12:56120800-56122000 | Transcr. at gene 5' and 3' | Fetal Stomach | stomach |
| 21 | chr12:56120800-56122000 | Flanking Active TSS | Left Ventricle | heart |
| 22 | chr12:56120800-56122000 | Flanking Active TSS | Rectal Mucosa Donor 31 | rectum |
| 23 | chr12:56121000-56122000 | Flanking Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
| 24 | chr12:56121000-56122000 | Flanking Active TSS | Primary neutrophils fromperipheralblood | blood |
| 25 | chr12:56121000-56122000 | Flanking Active TSS | Brain Cingulate Gyrus | brain |
| 26 | chr12:56121000-56122000 | Flanking Active TSS | Brain Germinal Matrix | brain |
| 27 | chr12:56121000-56122000 | Flanking Active TSS | Brain Substantia Nigra | brain |
| 28 | chr12:56121000-56122000 | Flanking Active TSS | Fetal Brain Female | brain |
| 29 | chr12:56121000-56122000 | Transcr. at gene 5' and 3' | Fetal Lung | lung |
| 30 | chr12:56121000-56122000 | Flanking Active TSS | Rectal Mucosa Donor 29 | rectum |
| 31 | chr12:56121000-56122000 | Flanking Active TSS | Monocytes-CD14+_RO01746 | blood |
| 32 | chr12:56121000-56122200 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 33 | chr12:56121000-56122200 | Flanking Active TSS | Liver | Liver |
| 34 | chr12:56121000-56123600 | Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 35 | chr12:56121000-56124000 | Active TSS | iPS-18 Cell Line | embryonic stem cell |
| 36 | chr12:56121000-56124200 | Active TSS | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 37 | chr12:56121200-56122000 | Flanking Active TSS | ES-UCSF4 Cell Line | embryonic stem cell |
| 38 | chr12:56121200-56122000 | Flanking Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 39 | chr12:56121200-56122000 | Flanking Active TSS | Primary T helper 17 cells PMA-I stimulated | -- |
| 40 | chr12:56121200-56122000 | Flanking Active TSS | Brain Anterior Caudate | brain |
| 41 | chr12:56121200-56122000 | Flanking Active TSS | HUVEC | blood vessel |
| 42 | chr12:56121200-56122000 | Flanking Active TSS | K562 | blood |
| 43 | chr12:56121200-56122200 | Flanking Active TSS | Fetal Thymus | thymus |
| 44 | chr12:56121200-56122400 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 45 | chr12:56121200-56123600 | Active TSS | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 46 | chr12:56121200-56123800 | Active TSS | Sigmoid Colon | Sigmoid Colon |
| 47 | chr12:56121200-56124000 | Active TSS | ES-WA7 Cell Line | embryonic stem cell |
| 48 | chr12:56121200-56124000 | Active TSS | iPS DF 6.9 Cell Line | embryonic stem cell |
| 49 | chr12:56121200-56124000 | Active TSS | Aorta | Aorta |
| 50 | chr12:56121200-56124000 | Active TSS | Ovary | ovary |
