Variant report

Variant	rs57448152
Chromosome Location	chr8:64614045-64614046
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1520920	1.00[EUR][1000 genomes]
rs6994952	1.00[EUR][1000 genomes]
rs705981	1.00[EUR][1000 genomes]
rs73270941	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73270950	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73270957	0.97[AFR][1000 genomes]
rs73270961	1.00[EUR][1000 genomes]
rs7819256	1.00[EUR][1000 genomes]
rs7830446	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831343	chr8:64436268-64642328	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64601800-64615200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr8:64602000-64614800	Weak transcription	Fetal Brain Male	brain
3	chr8:64613600-64615400	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr8:64613600-64615400	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr8:64613800-64615200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr8:64613800-64616800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr8:64614000-64614800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr8:64614000-64615400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr8:64614000-64615400	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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