Variant report

Variant	rs574561419
Chromosome Location	chr8:107728535-107728536
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:107727853..107731882-chr8:107733080..107735284,3	MCF-7	breast:
2	chr8:107691238..107693332-chr8:107727540..107729802,2	K562	blood:

Extended variants
information (count: 15 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831419	chr8:107624709-107827801	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	esv2497761	chr8:107727985-107729549	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv5816	chr8:107728295-107729040	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv2178363	chr8:107728362-107729076	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3479769	chr8:107728453-107728971	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3491044	chr8:107728454-107728998	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3405848	chr8:107728462-107728979	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3491043	chr8:107728476-107728926	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv2838	chr8:107728485-107729001	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3479767	chr8:107728491-107728955	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3479766	chr8:107728493-107728957	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3366215	chr8:107728500-107728938	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3479765	chr8:107728504-107728909	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv3491045	chr8:107728505-107728933	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
15	esv3336493	chr8:107728520-107728908	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:93 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107679200-107738200	Weak transcription	Right Ventricle	heart
2	chr8:107681200-107730200	Weak transcription	Small Intestine	intestine
3	chr8:107690200-107730600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
4	chr8:107692000-107738400	Weak transcription	Colon Smooth Muscle	Colon
5	chr8:107694600-107738000	Weak transcription	Fetal Heart	heart
6	chr8:107696000-107737200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr8:107698200-107731000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
8	chr8:107707800-107737800	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr8:107710400-107735600	Weak transcription	Fetal Intestine Small	intestine
10	chr8:107710400-107738200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr8:107710400-107755400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr8:107711800-107738200	Weak transcription	Brain Angular Gyrus	brain
13	chr8:107717200-107737200	Weak transcription	Brain Hippocampus Middle	brain
14	chr8:107718000-107728600	Strong transcription	Primary monocytes fromperipheralblood	blood
15	chr8:107719000-107738200	Weak transcription	NHEK	skin
16	chr8:107719200-107742400	Weak transcription	Stomach Mucosa	stomach
17	chr8:107719600-107729800	Weak transcription	Spleen	Spleen
18	chr8:107719600-107731000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
19	chr8:107719600-107732400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr8:107719600-107737000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
21	chr8:107719600-107737400	Weak transcription	Psoas Muscle	Psoas
22	chr8:107719600-107738000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr8:107719600-107738200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr8:107719600-107738400	Weak transcription	Muscle Satellite Cultured Cells	--
25	chr8:107719600-107739600	Weak transcription	Left Ventricle	heart
26	chr8:107719600-107762400	Weak transcription	Lung	lung
27	chr8:107719600-107765600	Weak transcription	Colonic Mucosa	Colon
28	chr8:107719600-107775200	Weak transcription	Gastric	stomach
29	chr8:107719600-107777800	Weak transcription	Esophagus	oesophagus
30	chr8:107719800-107730200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
31	chr8:107719800-107731200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
32	chr8:107719800-107738200	Weak transcription	Ovary	ovary
33	chr8:107719800-107753800	Weak transcription	Sigmoid Colon	Sigmoid Colon
34	chr8:107720000-107732400	Weak transcription	HepG2	liver
35	chr8:107720000-107738200	Weak transcription	HMEC	breast
36	chr8:107720600-107738200	Weak transcription	Aorta	Aorta
37	chr8:107720600-107738200	Weak transcription	Fetal Stomach	stomach
38	chr8:107720600-107738400	Weak transcription	Rectal Smooth Muscle	rectum
39	chr8:107720800-107736000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
40	chr8:107721200-107738200	Weak transcription	Fetal Muscle Trunk	muscle
41	chr8:107723200-107738000	Weak transcription	K562	blood
42	chr8:107724000-107732600	Weak transcription	Osteobl	bone
43	chr8:107724000-107737200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
44	chr8:107724000-107738000	Weak transcription	HUES64 Cell Line	embryonic stem cell
45	chr8:107724200-107730400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
46	chr8:107724200-107731000	Weak transcription	Primary T cells from cord blood	blood
47	chr8:107724200-107731000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
48	chr8:107724200-107731000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
49	chr8:107724200-107731000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
50	chr8:107724200-107732400	Weak transcription	Fetal Kidney	kidney

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