Variant report

Variant	rs574609208
Chromosome Location	chr16:77092301-77092302
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:77092274..77095002-chr16:77096388..77098456,2	MCF-7	breast:

Extended variants
information (count: 93 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:93 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1063069	chr16:76462850-77214064	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
2	nsv542963	chr16:76462850-77214064	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
3	esv2422474	chr16:76544108-77125562	Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases
4	nsv906947	chr16:76682263-77160626	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
5	nsv869201	chr16:76714549-77233646	Transcr. at gene 5' and 3' Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	28 gene(s)	inside rSNPs	diseases
6	nsv1057677	chr16:76861946-77230013	Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	26 gene(s)	inside rSNPs	diseases
7	nsv1065343	chr16:76927295-77279747	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
8	nsv542965	chr16:76927295-77279747	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Strong transcription Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
9	nsv906952	chr16:76944357-77155717	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
10	nsv1058017	chr16:76958488-77121870	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
11	nsv542966	chr16:76958488-77121870	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
12	nsv1055234	chr16:77003426-77467286	Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
13	nsv1065048	chr16:77003426-77675163	Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
14	esv2830376	chr16:77014551-77658185	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
15	nsv1065149	chr16:77032082-77671890	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
16	nsv1062349	chr16:77039764-77458731	Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
17	nsv542967	chr16:77039764-77458731	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
18	nsv511564	chr16:77081389-77093511	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
19	nsv573079	chr16:77081676-77092363	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
20	nsv573080	chr16:77081676-77092711	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
21	nsv573081	chr16:77081676-77092826	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
22	nsv573082	chr16:77081676-77093916	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
23	esv3510457	chr16:77089551-77094049	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
24	nsv512447	chr16:77089687-77093013	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
25	esv989264	chr16:77089786-77098066	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
26	esv3371199	chr16:77090051-77094749	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
27	esv3510456	chr16:77090101-77093899	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
28	esv3313428	chr16:77090309-77093122	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
29	esv3313426	chr16:77090506-77092972	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
30	esv3510455	chr16:77090530-77092953	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
31	esv3313427	chr16:77090559-77092942	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
32	esv3313425	chr16:77090564-77092933	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
33	esv3510458	chr16:77090638-77092863	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
34	esv3313429	chr16:77090641-77092866	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
35	esv14668	chr16:77091007-77092939	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
36	nsv573088	chr16:77091028-77092363	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
37	nsv573089	chr16:77091028-77092442	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
38	nsv573090	chr16:77091028-77092711	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
39	esv1793383	chr16:77091028-77092826	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
40	esv1796069	chr16:77091028-77092826	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
41	esv1796234	chr16:77091028-77092826	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
42	esv1796288	chr16:77091028-77092826	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
43	esv1796386	chr16:77091028-77092826	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
44	esv1797098	chr16:77091028-77092826	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
45	esv1797159	chr16:77091028-77092826	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
46	esv1797413	chr16:77091028-77092826	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
47	esv1797699	chr16:77091028-77092826	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
48	esv1798394	chr16:77091028-77092826	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
49	esv1800064	chr16:77091028-77092826	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
50	esv1800232	chr16:77091028-77092826	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:77091200-77097800	Enhancers	Primary neutrophils fromperipheralblood	blood

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