Variant report
| Variant | rs57471178 |
|---|---|
| Chromosome Location | chr2:73312909-73312910 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:73299200-73314800 | Weak transcription | Small Intestine | intestine |
| 2 | chr2:73299400-73314800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 3 | chr2:73299400-73314800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 4 | chr2:73299400-73318200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 5 | chr2:73299400-73318400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 6 | chr2:73299600-73314200 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 7 | chr2:73299600-73314600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 8 | chr2:73299600-73314800 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 9 | chr2:73299600-73315400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 10 | chr2:73299600-73316000 | Weak transcription | NHDF-Ad | bronchial |
| 11 | chr2:73299600-73319400 | Weak transcription | K562 | blood |
| 12 | chr2:73299800-73314800 | Weak transcription | Brain Substantia Nigra | brain |
| 13 | chr2:73299800-73314800 | Weak transcription | HSMM | muscle |
| 14 | chr2:73300000-73319200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 15 | chr2:73300200-73314200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 16 | chr2:73300600-73313000 | Strong transcription | Fetal Stomach | stomach |
| 17 | chr2:73302600-73316400 | Genic enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 18 | chr2:73303000-73328600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 19 | chr2:73303200-73320600 | Weak transcription | Psoas Muscle | Psoas |
| 20 | chr2:73303400-73313600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 21 | chr2:73303400-73320000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 22 | chr2:73304400-73314200 | Weak transcription | HSMMtube | muscle |
| 23 | chr2:73305600-73313400 | Weak transcription | NH-A | brain |
| 24 | chr2:73306600-73314800 | Weak transcription | HMEC | breast |
| 25 | chr2:73307000-73313800 | Weak transcription | Left Ventricle | heart |
| 26 | chr2:73307200-73314000 | Weak transcription | Brain Angular Gyrus | brain |
| 27 | chr2:73307400-73314400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 28 | chr2:73307800-73313800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 29 | chr2:73307800-73314800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 30 | chr2:73308000-73313600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 31 | chr2:73308000-73313800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 32 | chr2:73308400-73314400 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 33 | chr2:73308600-73313400 | Weak transcription | Right Ventricle | heart |
| 34 | chr2:73308800-73313600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 35 | chr2:73309000-73314000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 36 | chr2:73309000-73314200 | Weak transcription | Esophagus | oesophagus |
| 37 | chr2:73309000-73314400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 38 | chr2:73309200-73314600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 39 | chr2:73309200-73316200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 40 | chr2:73309200-73319400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 41 | chr2:73309600-73313200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 42 | chr2:73309600-73316600 | Strong transcription | HepG2 | liver |
| 43 | chr2:73309800-73315600 | Genic enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 44 | chr2:73310000-73313200 | Weak transcription | Ovary | ovary |
| 45 | chr2:73310000-73315200 | Genic enhancers | Fetal Muscle Leg | muscle |
| 46 | chr2:73310200-73313200 | Enhancers | HUVEC | blood vessel |
| 47 | chr2:73310400-73313200 | Enhancers | Primary hematopoietic stem cells | blood |
| 48 | chr2:73310400-73313200 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 49 | chr2:73310400-73313800 | Genic enhancers | Fetal Intestine Small | intestine |
| 50 | chr2:73310600-73313000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
