Variant report

Variant rs574726184
Chromosome Location chr13:53031070-53031071
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:53028400-53031600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
2 chr13:53028600-53033200 Active TSS GM12878-XiMat blood
3 chr13:53030000-53031200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr13:53030200-53031200 Flanking Active TSS NH-A brain
5 chr13:53030200-53050800 Weak transcription Gastric stomach
6 chr13:53030200-53052600 Weak transcription Spleen Spleen
7 chr13:53030200-53053800 Weak transcription Small Intestine intestine
8 chr13:53030400-53031200 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr13:53030400-53031200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr13:53030400-53031200 Flanking Active TSS Brain Germinal Matrix brain
11 chr13:53030400-53031200 Flanking Active TSS Duodenum Mucosa Duodenum
12 chr13:53030400-53031200 Flanking Active TSS NHEK skin
13 chr13:53030400-53031400 Flanking Active TSS Osteobl bone
14 chr13:53030400-53031600 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr13:53030400-53031600 Flanking Active TSS Muscle Satellite Cultured Cells --
16 chr13:53030400-53031600 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
17 chr13:53030400-53034200 Transcr. at gene 5' and 3' Dnd41 blood
18 chr13:53030400-53035200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr13:53030400-53035400 Weak transcription Left Ventricle heart
20 chr13:53030400-53035600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr13:53030400-53037200 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr13:53030400-53039200 Weak transcription Psoas Muscle Psoas
23 chr13:53030400-53048200 Weak transcription Pancreas Pancrea
24 chr13:53030400-53048400 Weak transcription Ovary ovary
25 chr13:53030400-53048600 Weak transcription Aorta Aorta
26 chr13:53030400-53050000 Weak transcription Esophagus oesophagus
27 chr13:53030400-53055800 Weak transcription Lung lung
28 chr13:53030600-53031200 Enhancers Primary B cells from cord blood blood
29 chr13:53030600-53031200 Enhancers Primary B cells from peripheral blood blood
30 chr13:53030600-53031200 Enhancers Primary T regulatory cells fromperipheralblood blood
31 chr13:53030600-53031200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
32 chr13:53030600-53031200 Enhancers Adipose Nuclei Adipose
33 chr13:53030600-53031200 Flanking Active TSS Hela-S3 cervix
34 chr13:53030600-53031200 Flanking Active TSS HMEC breast
35 chr13:53030600-53031400 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr13:53030600-53031400 Enhancers Primary monocytes fromperipheralblood blood
37 chr13:53030600-53031400 Enhancers Primary T cells from cord blood blood
38 chr13:53030600-53031400 Enhancers Primary T helper 17 cells PMA-I stimulated --
39 chr13:53030600-53031800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
40 chr13:53030600-53032000 Transcr. at gene 5' and 3' HSMM muscle
41 chr13:53030600-53033200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
42 chr13:53030600-53035200 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr13:53030600-53035400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr13:53030600-53035400 Weak transcription Placenta Placenta
45 chr13:53030600-53037000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr13:53030600-53040800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr13:53030600-53044400 Weak transcription Colon Smooth Muscle Colon
48 chr13:53030600-53044600 Weak transcription Colonic Mucosa Colon
49 chr13:53030600-53049600 Weak transcription Brain Hippocampus Middle brain
50 chr13:53030600-53050200 Weak transcription Rectal Smooth Muscle rectum

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