The 2.0 version of rSNPBase

Variant report

Variant rs574859949
Chromosome Location chr2:7197646-7197647
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:7167400-7200400 Weak transcription Rectal Smooth Muscle rectum
2 chr2:7182000-7198000 Weak transcription Right Ventricle heart
3 chr2:7188800-7200800 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr2:7189400-7203200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr2:7189400-7213800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:7191400-7200400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr2:7194000-7200000 Enhancers Fetal Thymus thymus
8 chr2:7194200-7234000 Weak transcription Pancreas Pancrea
9 chr2:7194400-7202200 Weak transcription Ovary ovary
10 chr2:7194400-7210800 Weak transcription Lung lung
11 chr2:7194600-7198200 Weak transcription Brain Substantia Nigra brain
12 chr2:7194600-7201800 Weak transcription Fetal Kidney kidney
13 chr2:7194600-7206400 Weak transcription Brain Inferior Temporal Lobe brain
14 chr2:7194800-7198000 Enhancers Primary T helper naive cells fromperipheralblood blood
15 chr2:7194800-7202800 Weak transcription Brain Hippocampus Middle brain
16 chr2:7195000-7197800 Enhancers Primary T cells from cord blood blood
17 chr2:7195000-7197800 Enhancers Primary T helper naive cells from peripheral blood blood
18 chr2:7195000-7198200 Enhancers Primary T helper cells fromperipheralblood blood
19 chr2:7195000-7217000 Weak transcription Fetal Muscle Leg muscle
20 chr2:7195200-7200200 Enhancers Primary T regulatory cells fromperipheralblood blood
21 chr2:7195400-7198200 Enhancers Primary T helper cells PMA-I stimulated --
22 chr2:7195600-7201000 Enhancers Primary T killer naive cells fromperipheralblood blood
23 chr2:7195800-7200000 Enhancers Primary B cells from peripheral blood blood
24 chr2:7195800-7200200 Enhancers Primary hematopoietic stem cells blood
25 chr2:7196000-7200000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr2:7196000-7200600 Enhancers Primary T cells fromperipheralblood blood
27 chr2:7196200-7198000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr2:7196200-7199400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr2:7196400-7197800 Enhancers GM12878-XiMat blood
30 chr2:7196400-7200600 Enhancers Primary hematopoietic stem cells short term culture blood
31 chr2:7196600-7197800 Enhancers Primary B cells from cord blood blood
32 chr2:7196600-7199600 Enhancers Thymus Thymus
33 chr2:7196600-7200400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
34 chr2:7196800-7199800 Weak transcription Spleen Spleen
35 chr2:7196800-7200000 Enhancers Primary Natural Killer cells fromperipheralblood blood
36 chr2:7196800-7200200 Enhancers Primary monocytes fromperipheralblood blood
37 chr2:7196800-7202000 Weak transcription Right Atrium heart
38 chr2:7197200-7198400 Flanking Active TSS Dnd41 blood
39 chr2:7197200-7200000 Enhancers Primary T helper 17 cells PMA-I stimulated --
40 chr2:7197400-7197800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
41 chr2:7197600-7198200 Enhancers Pancreatic Islets Pancreatic Islet
42 chr2:7197600-7198400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
43 chr2:7197600-7199600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
44 chr2:7197600-7199800 Enhancers Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015