| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv590970 |
chr3:89987871-90441306 |
Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1003152 |
chr3:90257822-90485950 |
ZNF genes & repeats Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv999539 |
chr3:90268766-90485950 |
Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv834762 |
chr3:90279368-90439293 |
ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv10801 |
chr3:90280071-90504635 |
Weak transcription ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv834763 |
chr3:90286654-90489157 |
Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv1003056 |
chr3:90301998-90485950 |
ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv590975 |
chr3:90309058-90452642 |
Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv590976 |
chr3:90309058-90467825 |
Weak transcription ZNF genes & repeats Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv820794 |
chr3:90312310-90504635 |
ZNF genes & repeats Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv819576 |
chr3:90313054-90442925 |
Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG island
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
nsv590978 |
chr3:90313054-90442925 |
ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG island
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 13 |
nsv590980 |
chr3:90313394-90504645 |
ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 14 |
nsv590983 |
chr3:90318628-90504645 |
Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 15 |
nsv590984 |
chr3:90338519-90493882 |
ZNF genes & repeats Active TSS Bivalent/Poised TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 16 |
nsv590985 |
chr3:90339717-90487354 |
ZNF genes & repeats Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 17 |
nsv1010817 |
chr3:90364248-90485950 |
ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Genic enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 18 |
esv3324132 |
chr3:90429957-90448044 |
ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 19 |
esv6948 |
chr3:90430039-90447987 |
Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 20 |
esv3349430 |
chr3:90436262-90469260 |
Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 21 |
esv3332632 |
chr3:90436362-90469360 |
ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:21 , 50 per page) page:
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