Variant report

Variant rs5749527
Chromosome Location chr22:33254629-33254630
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:33222600-33258800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
2 chr22:33227000-33272400 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr22:33236200-33259000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr22:33237400-33282200 Weak transcription Fetal Brain Female brain
5 chr22:33238400-33259200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr22:33241600-33257800 Strong transcription HepG2 liver
7 chr22:33241600-33258400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr22:33243400-33257600 Weak transcription Fetal Brain Male brain
9 chr22:33243400-33260200 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr22:33243800-33255800 Weak transcription Muscle Satellite Cultured Cells --
11 chr22:33244200-33262000 Weak transcription Brain Germinal Matrix brain
12 chr22:33244800-33257800 Strong transcription NH-A brain
13 chr22:33245000-33258800 Weak transcription Pancreas Pancrea
14 chr22:33245400-33258800 Strong transcription HSMM muscle
15 chr22:33245600-33265000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr22:33245800-33264800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr22:33247000-33258400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr22:33247400-33257600 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr22:33247800-33260200 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr22:33248000-33258400 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr22:33248600-33257400 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr22:33248800-33255800 Weak transcription Duodenum Mucosa Duodenum
23 chr22:33249400-33257800 Weak transcription Small Intestine intestine
24 chr22:33249400-33258600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr22:33249600-33259000 Strong transcription Fetal Stomach stomach
26 chr22:33249800-33258200 Strong transcription Duodenum Smooth Muscle Duodenum
27 chr22:33249800-33258800 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr22:33249800-33262800 Weak transcription Brain Angular Gyrus brain
29 chr22:33250200-33257400 Genic enhancers Right Ventricle heart
30 chr22:33250400-33258800 Strong transcription Osteobl bone
31 chr22:33250600-33258800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr22:33250800-33255800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr22:33250800-33258400 Strong transcription Spleen Spleen
34 chr22:33251000-33256600 Strong transcription Lung lung
35 chr22:33251000-33257200 Strong transcription Fetal Muscle Leg muscle
36 chr22:33251000-33257400 Weak transcription Esophagus oesophagus
37 chr22:33251000-33257800 Strong transcription NHDF-Ad bronchial
38 chr22:33251400-33257600 Weak transcription Brain Substantia Nigra brain
39 chr22:33251400-33259000 Strong transcription Fetal Adrenal Gland Adrenal Gland
40 chr22:33251400-33259000 Strong transcription Stomach Smooth Muscle stomach
41 chr22:33251400-33259400 Weak transcription Right Atrium heart
42 chr22:33251600-33258400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr22:33251600-33258600 Strong transcription Adipose Nuclei Adipose
44 chr22:33251600-33259000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr22:33252000-33255200 Genic enhancers Fetal Heart heart
46 chr22:33252000-33256800 Genic enhancers Placenta Placenta
47 chr22:33252200-33257800 Strong transcription NHLF lung
48 chr22:33252400-33259200 Strong transcription Left Ventricle heart
49 chr22:33252400-33259200 Weak transcription Psoas Muscle Psoas
50 chr22:33252800-33256400 Strong transcription Colon Smooth Muscle Colon

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