Variant report

Variant	rs57498704
Chromosome Location	chr3:34463380-34463381
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs17031581	1.00[AMR][1000 genomes]
rs17031584	1.00[AMR][1000 genomes]
rs56035201	1.00[AMR][1000 genomes]
rs58166582	1.00[AMR][1000 genomes]
rs60339998	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60623514	1.00[AMR][1000 genomes]
rs6785311	1.00[AMR][1000 genomes]
rs6798027	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916961	chr3:34203879-34506554	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv876683	chr3:34451940-34536095	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:34462800-34463600	Enhancers	Fetal Heart	heart
2	chr3:34462800-34464200	Enhancers	HUVEC	blood vessel
3	chr3:34463200-34463600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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