Variant report

Variant rs5750113
Chromosome Location chr22:22220074-22220075
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22192200-22220200 Weak transcription Placenta Placenta
2 chr22:22194000-22220400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr22:22209800-22220200 Enhancers Primary T killer naive cells fromperipheralblood blood
4 chr22:22210800-22220400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr22:22211400-22220200 Enhancers Primary B cells from peripheral blood blood
6 chr22:22212000-22220600 Weak transcription Placenta Amnion Placenta Amnion
7 chr22:22212000-22221000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
8 chr22:22214600-22220200 Weak transcription Fetal Muscle Trunk muscle
9 chr22:22216000-22220400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr22:22216000-22220400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr22:22216000-22220400 Weak transcription Gastric stomach
12 chr22:22216000-22220800 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr22:22216200-22220400 Weak transcription Esophagus oesophagus
14 chr22:22216200-22220400 Weak transcription Lung lung
15 chr22:22216800-22220400 Enhancers Sigmoid Colon Sigmoid Colon
16 chr22:22217200-22220200 Enhancers Primary mononuclear cells fromperipheralblood Blood
17 chr22:22217400-22220400 Weak transcription Spleen Spleen
18 chr22:22218800-22220200 Enhancers Liver Liver
19 chr22:22218800-22220200 Enhancers Fetal Intestine Small intestine
20 chr22:22218800-22221000 Transcr. at gene 5' and 3' K562 blood
21 chr22:22219000-22220200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr22:22219000-22220200 Enhancers Brain Substantia Nigra brain
23 chr22:22219000-22220200 Enhancers Fetal Stomach stomach
24 chr22:22219000-22220400 Flanking Active TSS Dnd41 blood
25 chr22:22219000-22220400 Flanking Active TSS GM12878-XiMat blood
26 chr22:22219000-22220600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
27 chr22:22219000-22221000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
28 chr22:22219000-22221200 Active TSS Right Atrium heart
29 chr22:22219200-22220200 Flanking Active TSS HUES48 Cell Line embryonic stem cell
30 chr22:22219200-22220200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
31 chr22:22219200-22220200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr22:22219200-22220200 Flanking Active TSS NHEK skin
33 chr22:22219200-22220400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr22:22219200-22220400 Flanking Active TSS Muscle Satellite Cultured Cells --
35 chr22:22219200-22220400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
36 chr22:22219200-22220600 Enhancers Small Intestine intestine
37 chr22:22219200-22220800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
38 chr22:22219200-22221000 Flanking Active TSS Primary T cells from cord blood blood
39 chr22:22219200-22221400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr22:22219200-22222600 Active TSS Aorta Aorta
41 chr22:22219400-22220200 Flanking Active TSS HUES64 Cell Line embryonic stem cell
42 chr22:22219400-22220200 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
43 chr22:22219400-22220200 Flanking Active TSS HMEC breast
44 chr22:22219400-22220200 Flanking Active TSS HUVEC blood vessel
45 chr22:22219400-22220400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr22:22219400-22220400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr22:22219400-22220400 Flanking Active TSS Duodenum Mucosa Duodenum
48 chr22:22219400-22220400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
49 chr22:22219400-22220400 Weak transcription Stomach Mucosa stomach
50 chr22:22219400-22220800 Flanking Active TSS Brain Inferior Temporal Lobe brain

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