Variant report

Variant	rs575067120
Chromosome Location	chr4:46428047-46428048
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv878995	chr4:46422329-46589847	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:46427400-46428600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:46427800-46428400	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr4:46427800-46428600	Enhancers	HMEC	breast
4	chr4:46428000-46428400	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr4:46428000-46428400	Enhancers	Adipose Nuclei	Adipose
6	chr4:46428000-46428600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
7	chr4:46428000-46428600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr4:46428000-46428600	Enhancers	Hela-S3	cervix

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links