The 2.0 version of rSNPBase

Variant report

Variant rs575086798
Chromosome Location chr6:80881177-80881178
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:80836400-80891200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:80837000-80895200 Weak transcription Fetal Intestine Small intestine
3 chr6:80839200-80889600 Weak transcription Lung lung
4 chr6:80841200-80895800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr6:80842200-80914200 Weak transcription Primary B cells from cord blood blood
6 chr6:80853800-80891800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr6:80855200-80907000 Weak transcription Brain Hippocampus Middle brain
8 chr6:80855200-80907200 Weak transcription Ovary ovary
9 chr6:80855400-80886200 Weak transcription Fetal Muscle Leg muscle
10 chr6:80855400-80895400 Weak transcription Fetal Stomach stomach
11 chr6:80855800-80896000 Weak transcription Aorta Aorta
12 chr6:80863200-80907200 Weak transcription Psoas Muscle Psoas
13 chr6:80868600-80891200 Weak transcription Pancreas Pancrea
14 chr6:80870200-80884200 Weak transcription Left Ventricle heart
15 chr6:80870800-80886400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr6:80871400-80895800 Weak transcription Right Ventricle heart
17 chr6:80872000-80883000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr6:80873800-80883000 Weak transcription Duodenum Mucosa Duodenum
19 chr6:80873800-80883000 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr6:80874000-80881600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr6:80874000-80882600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr6:80874000-80884800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr6:80874000-80891000 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr6:80874000-80894000 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr6:80874200-80884400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr6:80874200-80887600 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr6:80874200-80888400 Weak transcription Fetal Intestine Large intestine
28 chr6:80874200-80899200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr6:80874600-80886200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr6:80875000-80881800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr6:80875000-80891200 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr6:80875200-80883000 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr6:80875200-80884600 Weak transcription Primary T cells from cord blood blood
34 chr6:80875200-80886400 Weak transcription Fetal Muscle Trunk muscle
35 chr6:80875200-80893200 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr6:80875400-80881400 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr6:80875400-80883000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr6:80875400-80883600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr6:80875400-80885000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr6:80875400-80891200 Weak transcription Hela-S3 cervix
41 chr6:80875600-80882000 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr6:80875600-80884800 Weak transcription HUVEC blood vessel
43 chr6:80875600-80891200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr6:80875800-80884200 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr6:80875800-80884800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr6:80875800-80884800 Weak transcription NHDF-Ad bronchial
47 chr6:80875800-80885000 Weak transcription HSMMtube muscle
48 chr6:80875800-80885200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr6:80875800-80891200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr6:80876000-80884000 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015