Variant report

Variant	rs575105862
Chromosome Location	chr7:103629083-103629084
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:103559740..103561344-chr7:103627840..103629599,2	K562	blood:
2	chr7:103628555..103630772-chr7:103847007..103849982,2	K562	blood:

Variant related genes	Relation type
ENSG00000164815	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3424622	chr7:103628741-103631589	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv3328063	chr7:103628966-103631164	Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:47 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103628600-103629600	Bivalent/Poised TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr7:103628600-103630800	Active TSS	K562	blood
3	chr7:103628800-103629400	Active TSS	Liver	Liver
4	chr7:103628800-103630000	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr7:103628800-103631000	Bivalent/Poised TSS	Brain Dorsolateral Prefrontal Cortex	brain
6	chr7:103629000-103629200	Flanking Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr7:103629000-103629200	Bivalent Enhancer	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr7:103629000-103629200	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
9	chr7:103629000-103629200	Bivalent/Poised TSS	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr7:103629000-103629200	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
11	chr7:103629000-103629200	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr7:103629000-103629200	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr7:103629000-103629200	Bivalent Enhancer	Brain Hippocampus Middle	brain
14	chr7:103629000-103629200	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
15	chr7:103629000-103629200	Bivalent Enhancer	Fetal Heart	heart
16	chr7:103629000-103629200	Flanking Bivalent TSS/Enh	Psoas Muscle	Psoas
17	chr7:103629000-103629200	Bivalent/Poised TSS	Skeletal Muscle Male	skeletal muscle
18	chr7:103629000-103629200	Bivalent Enhancer	Stomach Smooth Muscle	stomach
19	chr7:103629000-103629200	Bivalent Enhancer	NHEK	skin
20	chr7:103629000-103629400	Flanking Bivalent TSS/Enh	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr7:103629000-103629400	Bivalent Enhancer	Breast Myoepithelial Primary Cells	Breast
22	chr7:103629000-103629400	Bivalent Enhancer	Primary hematopoietic stem cells	blood
23	chr7:103629000-103629400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr7:103629000-103629400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr7:103629000-103629400	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr7:103629000-103629400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
27	chr7:103629000-103629400	Bivalent Enhancer	Fetal Muscle Leg	muscle
28	chr7:103629000-103629600	Bivalent/Poised TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr7:103629000-103629600	Bivalent/Poised TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr7:103629000-103629600	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
31	chr7:103629000-103629600	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
32	chr7:103629000-103629600	Enhancers	Pancreas	Pancrea
33	chr7:103629000-103629600	Active TSS	Right Atrium	heart
34	chr7:103629000-103629600	Bivalent/Poised TSS	HepG2	liver
35	chr7:103629000-103629800	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
36	chr7:103629000-103629800	Bivalent Enhancer	Fetal Brain Male	brain
37	chr7:103629000-103630600	Bivalent/Poised TSS	Fetal Brain Female	brain
38	chr7:103629000-103630800	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
39	chr7:103629000-103630800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
40	chr7:103629000-103631000	Active TSS	Brain Anterior Caudate	brain
41	chr7:103629000-103631000	Bivalent/Poised TSS	Fetal Stomach	stomach
42	chr7:103629000-103631000	Bivalent/Poised TSS	NHLF	lung
43	chr7:103629000-103631200	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
44	chr7:103629000-103631200	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
45	chr7:103629000-103631200	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
46	chr7:103629000-103631400	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
47	chr7:103629000-103631400	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum

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