Variant report

Variant	rs575140583
Chromosome Location	chr14:64068930-64068931
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:64061679..64063280-chr14:64068459..64070422,2	K562	blood:

Variant related genes	Relation type
ENSG00000270878	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv520528	chr14:63400786-64157117	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
2	nsv915909	chr14:63620440-64560369	Active TSS Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
3	nsv1048645	chr14:64057327-64283872	Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
4	nsv977475	chr14:64068246-64070579	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv528691	chr14:64068806-64098555	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:112 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:64061200-64081200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr14:64062000-64108000	Weak transcription	Spleen	Spleen
3	chr14:64062200-64070000	Weak transcription	Fetal Brain Female	brain
4	chr14:64062200-64070400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr14:64062200-64071600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr14:64062200-64077800	Weak transcription	Esophagus	oesophagus
7	chr14:64062200-64082400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr14:64062200-64107600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr14:64062600-64107000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr14:64062800-64105400	Weak transcription	Hela-S3	cervix
11	chr14:64063000-64069400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
12	chr14:64063200-64072200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr14:64063200-64092800	Weak transcription	Aorta	Aorta
14	chr14:64063400-64098600	Weak transcription	Small Intestine	intestine
15	chr14:64063600-64069200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr14:64063600-64071000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr14:64063800-64069200	Strong transcription	Primary T cells fromperipheralblood	blood
18	chr14:64063800-64070600	Strong transcription	Primary T helper cells fromperipheralblood	blood
19	chr14:64064200-64070800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
20	chr14:64064200-64071800	Weak transcription	Fetal Heart	heart
21	chr14:64064600-64069200	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
22	chr14:64064800-64069000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr14:64064800-64081000	Weak transcription	NHLF	lung
24	chr14:64065200-64069000	Strong transcription	Rectal Mucosa Donor 29	rectum
25	chr14:64065400-64069200	Strong transcription	Liver	Liver
26	chr14:64065400-64071200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
27	chr14:64065600-64069200	Strong transcription	Left Ventricle	heart
28	chr14:64065800-64081000	Weak transcription	Brain Hippocampus Middle	brain
29	chr14:64066000-64081200	Weak transcription	NHDF-Ad	bronchial
30	chr14:64066000-64081800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
31	chr14:64066200-64069000	Weak transcription	HMEC	breast
32	chr14:64066200-64070200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
33	chr14:64066200-64076800	Weak transcription	Placenta	Placenta
34	chr14:64066200-64080400	Weak transcription	HUVEC	blood vessel
35	chr14:64066200-64080800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
36	chr14:64066200-64081400	Weak transcription	Brain Anterior Caudate	brain
37	chr14:64066200-64081600	Weak transcription	Brain Cingulate Gyrus	brain
38	chr14:64066200-64081600	Weak transcription	Brain Inferior Temporal Lobe	brain
39	chr14:64066200-64082000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
40	chr14:64066200-64083800	Weak transcription	Lung	lung
41	chr14:64066200-64084200	Weak transcription	H9 Cell Line	embryonic stem cell
42	chr14:64066200-64086400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr14:64066200-64097400	Weak transcription	Gastric	stomach
44	chr14:64066200-64099400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
45	chr14:64066200-64107600	Weak transcription	Pancreas	Pancrea
46	chr14:64066400-64073600	Weak transcription	Rectal Mucosa Donor 31	rectum
47	chr14:64066400-64077000	Weak transcription	NH-A	brain
48	chr14:64066400-64079400	Weak transcription	Primary hematopoietic stem cells	blood
49	chr14:64066400-64079600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
50	chr14:64066400-64081200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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