Variant report

Variant rs57516814
Chromosome Location chr4:87983461-87983462
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:87964600-87995000 Weak transcription Hela-S3 cervix
2 chr4:87968800-87995000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr4:87969000-87994600 Weak transcription Placenta Amnion Placenta Amnion
4 chr4:87970200-87989800 Weak transcription H9 Cell Line embryonic stem cell
5 chr4:87975000-87987800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr4:87976200-87989800 Weak transcription Fetal Muscle Trunk muscle
7 chr4:87977000-87989400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr4:87978200-87983600 Enhancers Psoas Muscle Psoas
9 chr4:87979400-87983600 Strong transcription Dnd41 blood
10 chr4:87979600-87990000 Weak transcription Aorta Aorta
11 chr4:87979800-87984000 Strong transcription Primary B cells from cord blood blood
12 chr4:87979800-87989600 Weak transcription Fetal Muscle Leg muscle
13 chr4:87979800-87991800 Weak transcription A549 lung
14 chr4:87980000-87990000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr4:87980000-87994000 Weak transcription Primary monocytes fromperipheralblood blood
16 chr4:87980200-87983600 Strong transcription Fetal Thymus thymus
17 chr4:87980200-87983600 Enhancers Rectal Smooth Muscle rectum
18 chr4:87980200-87989800 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr4:87980400-87983600 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr4:87980400-87988800 Weak transcription Fetal Kidney kidney
21 chr4:87980400-87989400 Weak transcription Fetal Lung lung
22 chr4:87980400-87989600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr4:87980600-87987400 Weak transcription Lung lung
24 chr4:87980600-87988400 Weak transcription Brain Anterior Caudate brain
25 chr4:87980600-87989800 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr4:87980800-87984800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr4:87980800-87988000 Weak transcription Fetal Heart heart
28 chr4:87980800-87991000 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr4:87981000-87983800 Strong transcription Primary hematopoietic stem cells blood
30 chr4:87981000-87984200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr4:87981000-87988200 Weak transcription Adipose Nuclei Adipose
32 chr4:87981000-87988600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr4:87981000-87989800 Weak transcription Brain Cingulate Gyrus brain
34 chr4:87981000-87994600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr4:87981200-87983600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr4:87981200-87983600 Strong transcription Placenta Placenta
37 chr4:87981200-87987600 Weak transcription Brain Substantia Nigra brain
38 chr4:87981200-87988400 Weak transcription Ovary ovary
39 chr4:87981200-87988600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr4:87981200-87989600 Weak transcription Brain Angular Gyrus brain
41 chr4:87981200-87989600 Weak transcription Spleen Spleen
42 chr4:87981200-87990000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr4:87981200-87994000 Weak transcription HUVEC blood vessel
44 chr4:87981200-87994200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr4:87981400-87983600 Enhancers HMEC breast
46 chr4:87981600-87988200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr4:87981600-87988400 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr4:87981800-87989600 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr4:87982000-87983600 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr4:87982000-87983600 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --

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